Alice B Popejoy

Title(s)Assistant Professor, Med: Public Health Sciences
SchoolSchool of Medicine
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Reconciling diversity in health and genomic data collection with the regulation of AI in clinical genomics. Genet Med. 2024 Mar 28; 101127. McKibbin KJ, Popejoy AB, Shabani M. PMID: 38555522.
      View in: PubMed   Mentions:    Fields:    
    2. A draft human pangenome reference. Nature. 2023 05; 617(7960):312-324. Liao WW, Asri M, Ebler J, Doerr D, Haukness M, Hickey G, Lu S, Lucas JK, Monlong J, Abel HJ, Buonaiuto S, Chang XH, Cheng H, Chu J, Colonna V, Eizenga JM, Feng X, Fischer C, Fulton RS, Garg S, Groza C, Guarracino A, Harvey WT, Heumos S, Howe K, Jain M, Lu TY, Markello C, Martin FJ, Mitchell MW, Munson KM, Mwaniki MN, Novak AM, Olsen HE, Pesout T, Porubsky D, Prins P, Sibbesen JA, Sirén J, Tomlinson C, Villani F, Vollger MR, Antonacci-Fulton LL, Baid G, Baker CA, Belyaeva A, Billis K, Carroll A, Chang PC, Cody S, Cook DE, Cook-Deegan RM, Cornejo OE, Diekhans M, Ebert P, Fairley S, Fedrigo O, Felsenfeld AL, Formenti G, Frankish A, Gao Y, Garrison NA, Giron CG, Green RE, Haggerty L, Hoekzema K, Hourlier T, Ji HP, Kenny EE, Koenig BA, Kolesnikov A, Korbel JO, Kordosky J, Koren S, Lee H, Lewis AP, Magalhães H, Marco-Sola S, Marijon P, McCartney A, McDaniel J, Mountcastle J, Nattestad M, Nurk S, Olson ND, Popejoy AB, Puiu D, Rautiainen M, Regier AA, Rhie A, Sacco S, Sanders AD, Schneider VA, Schultz BI, Shafin K, Smith MW, Sofia HJ, Abou Tayoun AN, Thibaud-Nissen F, Tricomi FF, Wagner J, Walenz B, Wood JMD, Zimin AV, Bourque G, Chaisson MJP, Flicek P, Phillippy AM, Zook JM, Eichler EE, Haussler D, Wang T, Jarvis ED, Miga KH, Garrison E, Marschall T, Hall IM, Li H, Paten B. PMID: 37165242; PMCID: PMC10172123.
      View in: PubMed   Mentions: 100     Fields:    Translation:Humans
    3. The Human Pangenome Project: a global resource to map genomic diversity. Nature. 2022 04; 604(7906):437-446. Wang T, Antonacci-Fulton L, Howe K, Lawson HA, Lucas JK, Phillippy AM, Popejoy AB, Asri M, Carson C, Chaisson MJP, Chang X, Cook-Deegan R, Felsenfeld AL, Fulton RS, Garrison EP, Garrison NA, Graves-Lindsay TA, Ji H, Kenny EE, Koenig BA, Li D, Marschall T, McMichael JF, Novak AM, Purushotham D, Schneider VA, Schultz BI, Smith MW, Sofia HJ, Weissman T, Flicek P, Li H, Miga KH, Paten B, Jarvis ED, Hall IM, Eichler EE, Haussler D, Human Pangenome Reference Consortium. PMID: 35444317; PMCID: PMC9402379.
      View in: PubMed   Mentions: 96     Fields:    Translation:Humans
    4. ClinGen Variant Curation Interface: a variant classification platform for the application of evidence criteria from ACMG/AMP guidelines. Genome Med. 2022 01 18; 14(1):6. Preston CG, Wright MW, Madhavrao R, Harrison SM, Goldstein JL, Luo X, Wand H, Wulf B, Cheung G, Mandell ME, Tong H, Cheng S, Iacocca MA, Pineda AL, Popejoy AB, Dalton K, Zhen J, Dwight SS, Babb L, DiStefano M, O'Daniel JM, Lee K, Riggs ER, Zastrow DB, Mester JL, Ritter DI, Patel RY, Subramanian SL, Milosavljevic A, Berg JS, Rehm HL, Plon SE, Cherry JM, Bustamante CD, Costa HA, Clinical Genome Resource (ClinGen). PMID: 35039090; PMCID: PMC8764818.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    5. Ancestral diversity is limited in published T cell receptor sequencing studies. Immunity. 2021 10 12; 54(10):2177-2179. Huang YN, Peng K, Popejoy AB, Hu J, Nowicki TS, Gold SM, Quintana-Murci L, Fuentes-Guajardo M, Shugay M, Greiff V, Burkhardt AM, Alachkar H, Mangul S. PMID: 34644550.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    6. Office of Management and Budget Racial/Ethnic Categories in Mortality Research: A Framework for Including the Voices of Racialized Communities. Am J Public Health. 2021 07; 111(S2):S133-S140. Hayes-Bautista DE, Bryant M, Yudell M, Hayes-Bautista TM, Partlow K, Popejoy AB, Burchard E, Hsu P. PMID: 34314200; PMCID: PMC8495649.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    7. Diversity in immunogenomics: the value and the challenge. Nat Methods. 2021 06; 18(6):588-591. Peng K, Safonova Y, Shugay M, Popejoy AB, Rodriguez OL, Breden F, Brodin P, Burkhardt AM, Bustamante C, Cao-Lormeau VM, Corcoran MM, Duffy D, Fuentes-Guajardo M, Fujita R, Greiff V, Jönsson VD, Liu X, Quintana-Murci L, Rossetti M, Xie J, Yaari G, Zhang W, Abedalthagafi MS, Adekoya KO, Ahmed RA, Chang WC, Gray C, Nakamura Y, Lees WD, Khatri P, Alachkar H, Scheepers C, Watson CT, Karlsson Hedestam GB, Mangul S. PMID: 34002093; PMCID: PMC8842483.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    8. Truth and Reconciliation of Racial and Ethnic Health Disparities: A Case Study of COVID-19. Am J Bioeth. 2021 03; 21(3):79-83. Popejoy AB. PMID: 33616495.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCellsPHPublic Health
    9. Clinical Genetics Lacks Standard Definitions and Protocols for the Collection and Use of Diversity Measures. Am J Hum Genet. 2020 07 02; 107(1):72-82. Popejoy AB, Crooks KR, Fullerton SM, Hindorff LA, Hooker GW, Koenig BA, Pino N, Ramos EM, Ritter DI, Wand H, Wright MW, Yudell M, Zou JY, Plon SE, Bustamante CD, Ormond KE, Clinical Genome Resource (ClinGen) Ancestry and Diversity Working Group. PMID: 32504544; PMCID: PMC7332657.
      View in: PubMed   Mentions: 25     Fields:    Translation:Humans
    10. Diversity In Precision Medicine And Pharmacogenetics: Methodological And Conceptual Considerations For Broadening Participation. Pharmgenomics Pers Med. 2019; 12:257-271. Popejoy AB. PMID: 31686892; PMCID: PMC6800456.
      View in: PubMed   Mentions: 25  
    11. Genome-wide Association Studies in Ancestrally Diverse Populations: Opportunities, Methods, Pitfalls, and Recommendations. Cell. 2019 10 17; 179(3):589-603. Peterson RE, Kuchenbaecker K, Walters RK, Chen CY, Popejoy AB, Periyasamy S, Lam M, Iyegbe C, Strawbridge RJ, Brick L, Carey CE, Martin AR, Meyers JL, Su J, Chen J, Edwards AC, Kalungi A, Koen N, Majara L, Schwarz E, Smoller JW, Stahl EA, Sullivan PF, Vassos E, Mowry B, Prieto ML, Cuellar-Barboza A, Bigdeli TB, Edenberg HJ, Huang H, Duncan LE. PMID: 31607513; PMCID: PMC6939869.
      View in: PubMed   Mentions: 246     Fields:    Translation:Humans
    12. Standardized Biogeographic Grouping System for Annotating Populations in Pharmacogenetic Research. Clin Pharmacol Ther. 2019 05; 105(5):1256-1262. Huddart R, Fohner AE, Whirl-Carrillo M, Wojcik GL, Gignoux CR, Popejoy AB, Bustamante CD, Altman RB, Klein TE. PMID: 30506572; PMCID: PMC6465129.
      View in: PubMed   Mentions: 49     Fields:    Translation:Humans
    13. The clinical imperative for inclusivity: Race, ethnicity, and ancestry (REA) in genomics. Hum Mutat. 2018 11; 39(11):1713-1720. Popejoy AB, Ritter DI, Crooks K, Currey E, Fullerton SM, Hindorff LA, Koenig B, Ramos EM, Sorokin EP, Wand H, Wright MW, Zou J, Gignoux CR, Bonham VL, Plon SE, Bustamante CD, Clinical Genome Resource (ClinGen) Ancestry and Diversity Working Group (ADWG). PMID: 30311373; PMCID: PMC6188707.
      View in: PubMed   Mentions: 63     Fields:    Translation:Humans
    14. Vitamin D levels, brain volume, and genetic architecture in patients with psychosis. PLoS One. 2018; 13(8):e0200250. Berg AO, Jørgensen KN, Nerhus M, Athanasiu L, Popejoy AB, Bettella F, Norbom LCB, Gurholt TP, Dahl SR, Andreassen OA, Djurovic S, Agartz I, Melle I. PMID: 30142216; PMCID: PMC6108467.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    15. Estimating relationships between phenotypes and subjects drawn from admixed families. BMC Proc. 2016; 10(Suppl 7):357-362. Blue EM, Brown LA, Conomos MP, Kirk JL, Nato AQ, Popejoy AB, Raffa J, Ranola J, Wijsman EM, Thornton T. PMID: 27980662; PMCID: PMC5133521.
      View in: PubMed   Mentions: 3  
    16. Genomics is failing on diversity. Nature. 2016 10 13; 538(7624):161-164. Popejoy AB, Fullerton SM. PMID: 27734877; PMCID: PMC5089703.
      View in: PubMed   Mentions: 742     Fields:    Translation:Humans
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