Eric Trautmann

Title(s)Assistant Adjunct Professor, Med: Neurological Surgery
SchoolSchool of Medicine
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. DREDge: robust motion correction for high-density extracellular recordings across species. Nat Methods. 2025 Apr; 22(4):788-800. Windolf C, Yu H, Paulk AC, Meszéna D, Muñoz W, Boussard J, Hardstone R, Caprara I, Jamali M, Kfir Y, Xu D, Chung JE, Sellers KK, Ye Z, Shaker J, Lebedeva A, Raghavan RT, Trautmann E, Melin M, Couto J, Garcia S, Coughlin B, Elmaleh M, Christianson D, Greenlee JDW, Horváth C, Fiáth R, Ulbert I, Long MA, Movshon JA, Shadlen MN, Churchland MM, Churchland AK, Steinmetz NA, Chang EF, Schweitzer JS, Williams ZM, Cash SS, Paninski L, Varol E. PMID: 40050699.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimals
    2. An application-based taxonomy for brain-computer interfaces. Nat Biomed Eng. 2024 Dec 23. Robinson JT, Norman SL, Angle MR, Constandinou TG, Denison T, Donoghue JP, Field RM, Forsland A, Kouider S, Millán JDR, Michaels JA, Orsborn AL, Pandarinath C, Pruszynski JA, Rozell CJ, Shah NP, Shanechi MM, Shoaran M, Sheth SA, Stavisky SD, Trautmann E, Vachicouras N, Xie C. PMID: 39715900.
      View in: PubMed   Mentions:    Fields:    
    3. Direct observation of the neural computations underlying a single decision. Elife. 2024 Oct 18; 12. Steinemann N, Stine GM, Trautmann E, Zylberberg A, Wolpert DM, Shadlen MN. PMID: 39422555; PMCID: PMC11488853.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    4. Formation of Anisotropic Conducting Interlayer for High-Resolution Epidermal Electromyography Using Mixed-Conducting Particulate Composite. Adv Sci (Weinh). 2024 Jul; 11(27):e2308014. Zhao Z, Yu H, Wisniewski DJ, Cea C, Ma L, Trautmann EM, Churchland MM, Gelinas JN, Khodagholy D. PMID: 38600655; PMCID: PMC11251554.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimals
    5. DREDge: robust motion correction for high-density extracellular recordings across species. bioRxiv. 2023 Oct 29. Windolf C, Yu H, Paulk AC, Meszéna D, Muñoz W, Boussard J, Hardstone R, Caprara I, Jamali M, Kfir Y, Xu D, Chung JE, Sellers KK, Ye Z, Shaker J, Lebedeva A, Raghavan M, Trautmann E, Melin M, Couto J, Garcia S, Coughlin B, Horváth C, Fiáth R, Ulbert I, Movshon JA, Shadlen MN, Churchland MM, Churchland AK, Steinmetz NA, Chang EF, Schweitzer JS, Williams ZM, Cash SS, Paninski L, Varol E. PMID: 37961359; PMCID: PMC10634799.
      View in: PubMed   Mentions: 1  
    6. Bypassing spike sorting: Density-based decoding using spike localization from dense multielectrode probes. bioRxiv. 2023 Sep 22. Zhang Y, He T, Boussard J, Windolf C, Winter O, Trautmann E, Roth N, Barrell H, Churchland M, Steinmetz NA, International Brain Laboratory, Varol E, Hurwitz C, Paninski L. PMID: 37790422; PMCID: PMC10542538.
      View in: PubMed   Mentions:
    7. Modified Neuropixels probes for recording human neurophysiology in the operating room. Nat Protoc. 2023 10; 18(10):2927-2953. Coughlin B, Muñoz W, Kfir Y, Young MJ, Meszéna D, Jamali M, Caprara I, Hardstone R, Khanna A, Mustroph ML, Trautmann EM, Windolf C, Varol E, Soper DJ, Stavisky SD, Welkenhuysen M, Dutta B, Shenoy KV, Hochberg LR, Mark Richardson R, Williams ZM, Cash SS, Paulk AC. PMID: 37697108.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    8. A neural mechanism for terminating decisions. Neuron. 2023 08 16; 111(16):2601-2613.e5. Stine GM, Trautmann EM, Jeurissen D, Shadlen MN. PMID: 37352857; PMCID: PMC10565788.
      View in: PubMed   Mentions: 14     Fields:    
    9. Discovering Precise Temporal Patterns in Large-Scale Neural Recordings through Robust and Interpretable Time Warping. Neuron. 2023 May 17; 111(10):1685. Williams AH, Poole B, Maheswaranathan N, Dhawale AK, Fisher T, Wilson CD, Brann DH, Trautmann EM, Ryu S, Shusterman R, Rinberg D, Ölveczky BP, Shenoy KV, Gangul S. PMID: 37201504.
      View in: PubMed   Mentions:    Fields:    
    10. ROBUST ONLINE MULTIBAND DRIFT ESTIMATION IN ELECTROPHYSIOLOGY DATA. Proc IEEE Int Conf Acoust Speech Signal Process. 2023 Jun; 2023. Windolf C, Paulk AC, Kfir Y, Trautmann E, Meszéna D, Muñoz W, Caprara I, Jamali M, Boussard J, Williams ZM, Cash SS, Paninski L, Varol E. PMID: 37388234; PMCID: PMC10308877.
      View in: PubMed   Mentions: 1  
    11. Large-scale high-density brain-wide neural recording in nonhuman primates. bioRxiv. 2023 May 04. Trautmann EM, Hesse JK, Stine GM, Xia R, Zhu S, O'Shea DJ, Karsh B, Colonell J, Lanfranchi FF, Vyas S, Zimnik A, Steinmann NA, Wagenaar DA, Andrei A, Lopez CM, O'Callaghan J, Putzeys J, Raducanu BC, Welkenhuysen M, Churchland M, Moore T, Shadlen M, Shenoy K, Tsao D, Dutta B, Harris T. PMID: 37205406; PMCID: PMC10187172.
      View in: PubMed   Mentions: 1  
    12. Flexible neural control of motor units. Nat Neurosci. 2022 11; 25(11):1492-1504. Marshall NJ, Glaser JI, Trautmann EM, Amematsro EA, Perkins SM, Shadlen MN, Abbott LF, Cunningham JP, Churchland MM. PMID: 36216998; PMCID: PMC9633430.
      View in: PubMed   Mentions: 30     Fields:    Translation:AnimalsCells
    13. Large-scale neural recordings with single neuron resolution using Neuropixels probes in human cortex. Nat Neurosci. 2022 02; 25(2):252-263. Paulk AC, Kfir Y, Khanna AR, Mustroph ML, Trautmann EM, Soper DJ, Stavisky SD, Welkenhuysen M, Dutta B, Shenoy KV, Hochberg LR, Richardson RM, Williams ZM, Cash SS. PMID: 35102333.
      View in: PubMed   Mentions: 82     Fields:    Translation:HumansAnimalsCells
    14. Cortical preparatory activity indexes learned motor memories. Nature. 2022 02; 602(7896):274-279. Sun X, O'Shea DJ, Golub MD, Trautmann EM, Vyas S, Ryu SI, Shenoy KV. PMID: 35082444; PMCID: PMC9851374.
      View in: PubMed   Mentions: 37     Fields:    
    15. Dendritic calcium signals in rhesus macaque motor cortex drive an optical brain-computer interface. Nat Commun. 2021 06 17; 12(1):3689. Trautmann EM, O'Shea DJ, Sun X, Marshel JH, Crow A, Hsueh B, Vesuna S, Cofer L, Bohner G, Allen W, Kauvar I, Quirin S, MacDougall M, Chen Y, Whitmire MP, Ramakrishnan C, Sahani M, Seidemann E, Ryu SI, Deisseroth K, Shenoy KV. PMID: 34140486; PMCID: PMC8211867.
      View in: PubMed   Mentions: 33     Fields:    Translation:AnimalsCells
    16. Discovering Precise Temporal Patterns in Large-Scale Neural Recordings through Robust and Interpretable Time Warping. Neuron. 2020 01 22; 105(2):246-259.e8. Williams AH, Poole B, Maheswaranathan N, Dhawale AK, Fisher T, Wilson CD, Brann DH, Trautmann EM, Ryu S, Shusterman R, Rinberg D, Ölveczky BP, Shenoy KV, Ganguli S. PMID: 31786013; PMCID: PMC7336835.
      View in: PubMed   Mentions: 34     Fields:    Translation:AnimalsCells
    17. Accurate Estimation of Neural Population Dynamics without Spike Sorting. Neuron. 2019 07 17; 103(2):292-308.e4. Trautmann EM, Stavisky SD, Lahiri S, Ames KC, Kaufman MT, O'Shea DJ, Vyas S, Sun X, Ryu SI, Ganguli S, Shenoy KV. PMID: 31171448; PMCID: PMC7002296.
      View in: PubMed   Mentions: 95     Fields:    
    18. Inferring single-trial neural population dynamics using sequential auto-encoders. Nat Methods. 2018 10; 15(10):805-815. Pandarinath C, O'Shea DJ, Collins J, Jozefowicz R, Stavisky SD, Kao JC, Trautmann EM, Kaufman MT, Ryu SI, Hochberg LR, Henderson JM, Shenoy KV, Abbott LF, Sussillo D. PMID: 30224673; PMCID: PMC6380887.
      View in: PubMed   Mentions: 207     Fields:    
    19. The need for calcium imaging in nonhuman primates: New motor neuroscience and brain-machine interfaces. Exp Neurol. 2017 01; 287(Pt 4):437-451. O'Shea DJ, Trautmann E, Chandrasekaran C, Stavisky S, Kao JC, Sahani M, Ryu S, Deisseroth K, Shenoy KV. PMID: 27511294; PMCID: PMC5154795.
      View in: PubMed   Mentions: 24     Fields:    
    20. Design of an implantable artificial dural window for chronic two-photon optical imaging in non-human primates. Annu Int Conf IEEE Eng Med Biol Soc. 2015; 2015:7554-7. Trautmann E, O'Shea DJ, Shrestha S, Lin S, Ryu S, Shenoy K. PMID: 26738040; PMCID: PMC8867469.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
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