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Matthew A Coleman, PhD

Title(s)Adjunct Professor, Radiation Oncology
SchoolUniversity of California, Davis
Address4501 X Street, Suite G140
CA 95817
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Single-Cell Transcriptomic Analysis of Tumor-Derived Fibroblasts and Normal Tissue-Resident Fibroblasts Reveals Fibroblast Heterogeneity in Breast Cancer. Cancers (Basel). 2020 May 21; 12(5). Sebastian A, Hum NR, Martin KA, Gilmore SF, Peran I, Byers SW, Wheeler EK, Coleman MA, Loots GG. PMID: 32455670.
      View in: PubMed   Mentions:
    2. Comparative Molecular Analysis of Cancer Behavior Cultured In Vitro, In Vivo, and Ex Vivo. Cancers (Basel). 2020 Mar 14; 12(3). Hum NR, Sebastian A, Gilmore SF, He W, Martin KA, Hinckley A, Dubbin KR, Moya ML, Wheeler EK, Coleman MA, Loots GG. PMID: 32183351.
      View in: PubMed   Mentions:
    3. Author Correction: Membrane protein megahertz crystallography at the European XFEL. Nat Commun. 2020 Jan 30; 11(1):703. Gisriel C, Coe J, Letrun R, Yefanov OM, Luna-Chavez C, Stander NE, Lisova S, Mariani V, Kuhn M, Aplin S, Grant TD, Dörner K, Sato T, Echelmeier A, Villarreal JC, Hunter MS, Wiedorn MO, Knoska J, Mazalova V, Roy-Chowdhury S, Yang JH, Jones A, Bean R, Bielecki J, Kim Y, Mills G, Weinhausen B, Meza JD, Al-Qudami N, Bajt S, Brehm G, Botha S, Boukhelef D, Brockhauser S, Bruce BD, Coleman MA, Danilevski C, Discianno E, Dobson Z, Fangohr H, Martin-Garcia JM, Gevorkov Y, Hauf S, Hosseinizadeh A, Januschek F, Ketawala GK, Kupitz C, Maia L, Manetti M, Messerschmidt M, Michelat T, Mondal J, Ourmazd A, Previtali G, Sarrou I, Schön S, Schwander P, Shelby ML, Silenzi A, Sztuk-Dambietz J, Szuba J, Turcato M, White TA, Wrona K, Xu C, Abdellatif MH, Zook JD, Spence JCH, Chapman HN, Barty A, Kirian RA, Frank M, Ros A, Schmidt M, Fromme R, Mancuso AP, Fromme P, Zatsepin NA. PMID: 32001708.
      View in: PubMed   Mentions:    Fields:    
    4. Cationic HDL mimetics enhance in vivo delivery of self-replicating mRNA. Nanomedicine. 2020 02; 24:102154. He W, Evans AC, Rasley A, Bourguet F, Peters S, Kamrud KI, Wang N, Hubby B, Felderman M, Gouvis H, Coleman MA, Fischer NO. PMID: 31982617.
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    5. CPT1A/2-Mediated FAO Enhancement-A Metabolic Target in Radioresistant Breast Cancer. Front Oncol. 2019; 9:1201. Han S, Wei R, Zhang X, Jiang N, Fan M, Huang JH, Xie B, Zhang L, Miao W, Butler AC, Coleman MA, Vaughan AT, Wang Y, Chen HW, Liu J, Li JJ. PMID: 31803610.
      View in: PubMed   Mentions:
    6. Membrane protein megahertz crystallography at the European XFEL. Nat Commun. 2019 11 04; 10(1):5021. Gisriel C, Coe J, Letrun R, Yefanov OM, Luna-Chavez C, Stander NE, Lisova S, Mariani V, Kuhn M, Aplin S, Grant TD, Dörner K, Sato T, Echelmeier A, Cruz Villarreal J, Hunter MS, Wiedorn MO, Knoska J, Mazalova V, Roy-Chowdhury S, Yang JH, Jones A, Bean R, Bielecki J, Kim Y, Mills G, Weinhausen B, Meza JD, Al-Qudami N, Bajt S, Brehm G, Botha S, Boukhelef D, Brockhauser S, Bruce BD, Coleman MA, Danilevski C, Discianno E, Dobson Z, Fangohr H, Martin-Garcia JM, Gevorkov Y, Hauf S, Hosseinizadeh A, Januschek F, Ketawala GK, Kupitz C, Maia L, Manetti M, Messerschmidt M, Michelat T, Mondal J, Ourmazd A, Previtali G, Sarrou I, Schön S, Schwander P, Shelby ML, Silenzi A, Sztuk-Dambietz J, Szuba J, Turcato M, White TA, Wrona K, Xu C, Abdellatif MH, Zook JD, Spence JCH, Chapman HN, Barty A, Kirian RA, Frank M, Ros A, Schmidt M, Fromme R, Mancuso AP, Fromme P, Zatsepin NA. PMID: 31685819.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    7. Lipid and Protein Transfer between Nanolipoprotein Particles and Supported Lipid Bilayers. Langmuir. 2019 09 17; 35(37):12071-12078. Dang AT, He W, Ivey DB, Coleman MA, Kuhl TL. PMID: 31442053.
      View in: PubMed   Mentions:    Fields:    
    8. Cell-Free Co-Translational Approaches for Producing Mammalian Receptors: Expanding the Cell-Free Expression Toolbox Using Nanolipoproteins. Front Pharmacol. 2019; 10:744. Shelby ML, He W, Dang AT, Kuhl TL, Coleman MA. PMID: 31333463.
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    9. Megahertz serial crystallography. Nat Commun. 2018 10 02; 9(1):4025. Wiedorn MO, Oberthür D, Bean R, Schubert R, Werner N, Abbey B, Aepfelbacher M, Adriano L, Allahgholi A, Al-Qudami N, Andreasson J, Aplin S, Awel S, Ayyer K, Bajt S, Barák I, Bari S, Bielecki J, Botha S, Boukhelef D, Brehm W, Brockhauser S, Cheviakov I, Coleman MA, Cruz-Mazo F, Danilevski C, Darmanin C, Doak RB, Domaracky M, Dörner K, Du Y, Fangohr H, Fleckenstein H, Frank M, Fromme P, Gañán-Calvo AM, Gevorkov Y, Giewekemeyer K, Ginn HM, Graafsma H, Graceffa R, Greiffenberg D, Gumprecht L, Göttlicher P, Hajdu J, Hauf S, Heymann M, Holmes S, Horke DA, Hunter MS, Imlau S, Kaukher A, Kim Y, Klyuev A, Knoška J, Kobe B, Kuhn M, Kupitz C, Küpper J, Lahey-Rudolph JM, Laurus T, Le Cong K, Letrun R, Xavier PL, Maia L, Maia FRNC, Mariani V, Messerschmidt M, Metz M, Mezza D, Michelat T, Mills G, Monteiro DCF, Morgan A, Mühlig K, Munke A, Münnich A, Nette J, Nugent KA, Nuguid T, Orville AM, Pandey S, Pena G, Villanueva-Perez P, Poehlsen J, Previtali G, Redecke L, Riekehr WM, Rohde H, Round A, Safenreiter T, Sarrou I, Sato T, Schmidt M, Schmitt B, Schönherr R, Schulz J, Sellberg JA, Seibert MM, Seuring C, Shelby ML, Shoeman RL, Sikorski M, Silenzi A, Stan CA, Shi X, Stern S, Sztuk-Dambietz J, Szuba J, Tolstikova A, Trebbin M, Trunk U, Vagovic P, Ve T, Weinhausen B, White TA, Wrona K, Xu C, Yefanov O, Zatsepin N, Zhang J, Perbandt M, Mancuso AP, Betzel C, Chapman H, Barty A. PMID: 30279492.
      View in: PubMed   Mentions: 6     Fields:    
    10. Femtosecond X-ray coherent diffraction of aligned amyloid fibrils on low background graphene. Nat Commun. 2018 05 09; 9(1):1836. Seuring C, Ayyer K, Filippaki E, Barthelmess M, Longchamp JN, Ringler P, Pardini T, Wojtas DH, Coleman MA, Dörner K, Fuglerud S, Hammarin G, Habenstein B, Langkilde AE, Loquet A, Meents A, Riek R, Stahlberg H, Boutet S, Hunter MS, Koglin J, Liang M, Ginn HM, Millane RP, Frank M, Barty A, Chapman HN. PMID: 29743480.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    11. Single-Molecule Fluorescence Detection of the Epidermal Growth Factor Receptor in Membrane Discs. Biochemistry. 2019 01 29; 58(4):286-294. Quinn SD, Srinivasan S, Gordon JB, He W, Carraway KL, Coleman MA, Schlau-Cohen GS. PMID: 29553754.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    12. Nanodelivery of a functional membrane receptor to manipulate cellular phenotype. Sci Rep. 2018 02 23; 8(1):3556. Patriarchi T, Shen A, He W, Baikoghli M, Cheng RH, Xiang YK, Coleman MA, Tian L. PMID: 29476125.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    13. Small-angle X-ray and neutron scattering demonstrates that cell-free expression produces properly formed disc-shaped nanolipoprotein particles. Protein Sci. 2018 03; 27(3):780-789. Cleveland TE, He W, Evans AC, Fischer NO, Lau EY, Coleman MA, Butler P. PMID: 29266475.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    14. Cell-free production of a functional oligomeric form of a Chlamydia major outer-membrane protein (MOMP) for vaccine development. J Biol Chem. 2017 09 08; 292(36):15121-15132. He W, Felderman M, Evans AC, Geng J, Homan D, Bourguet F, Fischer NO, Li Y, Lam KS, Noy A, Xing L, Cheng RH, Rasley A, Blanchette CD, Kamrud K, Wang N, Gouvis H, Peterson TC, Hubby B, Coleman MA. PMID: 28739800.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    15. Synthesis and biochemical characterization of EGF receptor in a water-soluble membrane model system. PLoS One. 2017; 12(6):e0177761. Scharadin TM, He W, Yiannakou Y, Tomilov AA, Saldana M, Cortopassi GA, Carraway KL, Coleman MA, Henderson PT. PMID: 28586369.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    16. Peripheral Blood Biomarkers Associated With Toxicity and Treatment Characteristics After 131I- Metaiodobenzylguanidine Therapy in Patients With Neuroblastoma. Int J Radiat Oncol Biol Phys. 2017 10 01; 99(2):468-475. Campbell K, Karski EE, Olow A, Edmondson DA, Kohlgruber AC, Coleman M, Haas-Kogan DA, Matthay KK, DuBois SG. PMID: 28871998.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    17. Re-directing bacterial microcompartment systems to enhance recombinant expression of lysis protein E from bacteriophage ?X174 in Escherichia coli. Microb Cell Fact. 2017 Apr 26; 16(1):71. Yung MC, Bourguet FA, Carpenter TS, Coleman MA. PMID: 28446197.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    18. Synthesis of two fluorescent GTP?S molecules and their biological relevance. Nucleosides Nucleotides Nucleic Acids. 2017 Jun 03; 36(6):379-391. Trans DJ, Bai R, Addison JB, Liu R, Hamel E, Coleman MA, Henderson PT. PMID: 28282254.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    19. Transcript Analysis for Internal Biodosimetry Using Peripheral Blood from Neuroblastoma Patients Treated with (131)I-mIBG, a Targeted Radionuclide. Radiat Res. 2016 09; 186(3):235-44. Edmondson DA, Karski EE, Kohlgruber A, Koneru H, Matthay KK, Allen S, Hartmann CL, Peterson LE, DuBois SG, Coleman MA. PMID: 27556353.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    20. Expression and Association of the Yersinia pestis Translocon Proteins, YopB and YopD, Are Facilitated by Nanolipoprotein Particles. PLoS One. 2016; 11(3):e0150166. Coleman MA, Cappuccio JA, Blanchette CD, Gao T, Arroyo ES, Hinz AK, Bourguet FA, Segelke B, Hoeprich PD, Huser T, Laurence TA, Motin VL, Chromy BA. PMID: 27015536.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    21. Corrigendum: Ionizing Particle Radiation as a Modulator of Endogenous Bone Marrow Cell Reprogramming: Implications for Hematological Cancers. Front Oncol. 2015; 5:255. Muralidharan S, Sasi SP, Zuriaga MA, Hirschi KK, Porada CD, Coleman MA, Walsh KX, Yan X, Goukassian DA. PMID: 26636037.
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    22. SOST Inhibits Prostate Cancer Invasion. PLoS One. 2015; 10(11):e0142058. Hudson BD, Hum NR, Thomas CB, Kohlgruber A, Sebastian A, Collette NM, Coleman MA, Christiansen BA, Loots GG. PMID: 26545120.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCells
    23. Ionizing Particle Radiation as a Modulator of Endogenous Bone Marrow Cell Reprogramming: Implications for Hematological Cancers. Front Oncol. 2015; 5:231. Muralidharan S, Sasi SP, Zuriaga MA, Hirschi KK, Porada CD, Coleman MA, Walsh KX, Yan X, Goukassian DA. PMID: 26528440.
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    24. Low-dose radiation affects cardiac physiology: gene networks and molecular signaling in cardiomyocytes. Am J Physiol Heart Circ Physiol. 2015 Dec 01; 309(11):H1947-63. Coleman MA, Sasi SP, Onufrak J, Natarajan M, Manickam K, Schwab J, Muralidharan S, Peterson LE, Alekseyev YO, Yan X, Goukassian DA. PMID: 26408534.
      View in: PubMed   Mentions: 7     Fields:    Translation:AnimalsCells
    25. Cell-free expression of functional receptor tyrosine kinases. Sci Rep. 2015 Aug 14; 5:12896. He W, Scharadin TM, Saldana M, Gellner C, Hoang-Phou S, Takanishi C, Hura GL, Tainer JA, Carraway KL, Henderson PT, Coleman MA. PMID: 26274523.
      View in: PubMed   Mentions: 10     Fields:    Translation:Cells
    26. Fixed-target protein serial microcrystallography with an x-ray free electron laser. Sci Rep. 2014 Aug 12; 4:6026. Hunter MS, Segelke B, Messerschmidt M, Williams GJ, Zatsepin NA, Barty A, Benner WH, Carlson DB, Coleman M, Graf A, Hau-Riege SP, Pardini T, Seibert MM, Evans J, Boutet S, Frank M. PMID: 25113598.
      View in: PubMed   Mentions: 49     Fields:    Translation:Cells
    27. Fluorescence correlation spectroscopy at micromolar concentrations without optical nanoconfinement. J Phys Chem B. 2014 Aug 14; 118(32):9662-7. Laurence TA, Ly S, Bourguet F, Fischer NO, Coleman MA. PMID: 25060197.
      View in: PubMed   Mentions: 4     Fields:    
    28. 7 Å resolution in protein two-dimensional-crystal X-ray diffraction at Linac Coherent Light Source. Philos Trans R Soc Lond B Biol Sci. 2014 Jul 17; 369(1647):20130500. Pedrini B, Tsai CJ, Capitani G, Padeste C, Hunter MS, Zatsepin NA, Barty A, Benner WH, Boutet S, Feld GK, Hau-Riege SP, Kirian RA, Kupitz C, Messerschmitt M, Ogren JI, Pardini T, Segelke B, Williams GJ, Spence JC, Abela R, Coleman M, Evans JE, Schertler GF, Frank M, Li XD. PMID: 24914166.
      View in: PubMed   Mentions: 8     Fields:    Translation:Cells
    29. The NRF2-KEAP1 pathway is an early responsive gene network in arsenic exposed lymphoblastoid cells. PLoS One. 2014; 9(2):e88069. Córdova EJ, Martínez-Hernández A, Uribe-Figueroa L, Centeno F, Morales-Marín M, Koneru H, Coleman MA, Orozco L. PMID: 24516582.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    30. Quantifying interactions of a membrane protein embedded in a lipid nanodisc using fluorescence correlation spectroscopy. Biophys J. 2014 Jan 21; 106(2):L05-8. Ly S, Bourguet F, Fischer NO, Lau EY, Coleman MA, Laurence TA. PMID: 24461026.
      View in: PubMed   Mentions: 7     Fields:    Translation:Cells
    31. Controlling the diameter, monodispersity, and solubility of ApoA1 nanolipoprotein particles using telodendrimer chemistry. Protein Sci. 2013 Aug; 22(8):1078-86. He W, Luo J, Bourguet F, Xing L, Yi SK, Gao T, Blanchette C, Henderson PT, Kuhn E, Malfatti M, Murphy WJ, Cheng RH, Lam KS, Coleman MA. PMID: 23754445.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    32. Nanosensor dosimetry of mouse blood proteins after exposure to ionizing radiation. Sci Rep. 2013; 3:2234. Kim D, Marchetti F, Chen Z, Zaric S, Wilson RJ, Hall DA, Gaster RS, Lee JR, Wang J, Osterfeld SJ, Yu H, White RM, Blakely WF, Peterson LE, Bhatnagar S, Mannion B, Tseng S, Roth K, Coleman M, Snijders AM, Wyrobek AJ, Wang SX. PMID: 23868657.
      View in: PubMed   Mentions: 15     Fields:    Translation:Animals
    33. DNA repair and cell cycle biomarkers of radiation exposure and inflammation stress in human blood. PLoS One. 2012; 7(11):e48619. Budworth H, Snijders AM, Marchetti F, Mannion B, Bhatnagar S, Kwoh E, Tan Y, Wang SX, Blakely WF, Coleman M, Peterson L, Wyrobek AJ. PMID: 23144912.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansCells
    34. Characterization of de novo synthesized GPCRs supported in nanolipoprotein discs. PLoS One. 2012; 7(9):e44911. Gao T, Petrlova J, He W, Huser T, Kudlick W, Voss J, Coleman MA. PMID: 23028674.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    35. Characterization of a novel lytic protein encoded by the Bacillus cereus E33L gene ampD as a Bacillus anthracis antimicrobial protein. Appl Environ Microbiol. 2012 Apr; 78(8):3025-7. Bourguet FA, Souza BE, Hinz AK, Coleman MA, Jackson PJ. PMID: 22344637.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    36. Low dose radiation response curves, networks and pathways in human lymphoblastoid cells exposed from 1 to 10cGy of acute gamma radiation. Mutat Res. 2011 Jun 17; 722(2):119-30. Wyrobek AJ, Manohar CF, Krishnan VV, Nelson DO, Furtado MR, Bhattacharya MS, Marchetti F, Coleman MA. PMID: 21497671.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansAnimalsCells
    37. Omics-current applications in toxicology. Mutat Res. 2011 Jun 17; 722(2):93. Coleman MA, Escobar PA, Mahadevan B. PMID: 21315831.
      View in: PubMed   Mentions:    Fields:    
    38. Characterizing diffusion dynamics of a membrane protein associated with nanolipoproteins using fluorescence correlation spectroscopy. Protein Sci. 2011 Feb; 20(2):437-47. Gao T, Blanchette CD, He W, Bourguet F, Ly S, Katzen F, Kudlicki WA, Henderson PT, Laurence TA, Huser T, Coleman MA. PMID: 21280134.
      View in: PubMed   Mentions: 13     Fields:    Translation:Cells
    39. Cell-free expression of soluble and membrane proteins in an array device for drug screening. Anal Chem. 2010 Aug 15; 82(16):7021-6. Khnouf R, Olivero D, Jin S, Coleman MA, Fan ZH. PMID: 20666430.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    40. An assessment of immediate DNA damage to occupationally exposed workers to low dose ionizing radiation by using the comet assay. Rev Invest Clin. 2010 Jan-Feb; 62(1):23-30. Martínez A, Coleman M, Romero-Talamás CA, Frias S. PMID: 20415056.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansPHPublic Health
    41. Characterization and purification of polydisperse reconstituted lipoproteins and nanolipoprotein particles. Int J Mol Sci. 2009 Jul 02; 10(7):2958-71. Blanchette CD, Segelke BW, Fischer N, Corzett MH, Kuhn EA, Cappuccio JA, Benner WH, Coleman MA, Chromy BA, Bench G, Hoeprich PD, Sulchek TA. PMID: 19742178.
      View in: PubMed   Mentions: 7     Fields:    
    42. Hydrogen production by a hyperthermophilic membrane-bound hydrogenase in water-soluble nanolipoprotein particles. J Am Chem Soc. 2009 Jun 10; 131(22):7508-9. Baker SE, Hopkins RC, Blanchette CD, Walsworth VL, Sumbad R, Fischer NO, Kuhn EA, Coleman M, Chromy BA, Létant SE, Hoeprich PD, Adams MW, Henderson PT. PMID: 19449869.
      View in: PubMed   Mentions: 14     Fields:    Translation:Cells
    43. An adaptable, portable microarray reader for biodetection. Sensors (Basel). 2009; 9(4):2524-37. Thompson DL, Pearson F, Thomas C, Rao R, Matthews D, Albala JS, Wachsmann-Hogiu S, Coleman MA. PMID: 22574030.
      View in: PubMed   Mentions: 2     Fields:    
    44. Logistic ensembles of Random Spherical Linear Oracles for microarray classification. Int J Data Min Bioinform. 2009; 3(4):382-97. Peterson LE, Coleman MA. PMID: 20052903.
      View in: PubMed   Mentions:    Fields:    
    45. Cell-free expression for nanolipoprotein particles: building a high-throughput membrane protein solubility platform. Methods Mol Biol. 2009; 498:273-96. Cappuccio JA, Hinz AK, Kuhn EA, Fletcher JE, Arroyo ES, Henderson PT, Blanchette CD, Walsworth VL, Corzett MH, Law RJ, Pesavento JB, Segelke BW, Sulchek TA, Chromy BA, Katzen F, Peterson T, Bench G, Kudlicki W, Hoeprich PD, Coleman MA. PMID: 18988032.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    46. Atomic force microscopy differentiates discrete size distributions between membrane protein containing and empty nanolipoprotein particles. Biochim Biophys Acta. 2009 Mar; 1788(3):724-31. Blanchette CD, Cappuccio JA, Kuhn EA, Segelke BW, Benner WH, Chromy BA, Coleman MA, Bench G, Hoeprich PD, Sulchek TA. PMID: 19109924.
      View in: PubMed   Mentions: 17     Fields:    
    47. Differential expression of TP53 associated genes in Fanconi anemia cells after mitomycin C and hydroxyurea treatment. Mutat Res. 2008 Oct 30; 656(1-2):1-7. Martinez A, Hinz JM, Gómez L, Molina B, Acuña H, Jones IM, Frias S, Coleman MA. PMID: 18647660.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    48. Cell-free co-expression of functional membrane proteins and apolipoprotein, forming soluble nanolipoprotein particles. Mol Cell Proteomics. 2008 Nov; 7(11):2246-53. Cappuccio JA, Blanchette CD, Sulchek TA, Arroyo ES, Kralj JM, Hinz AK, Kuhn EA, Chromy BA, Segelke BW, Rothschild KJ, Fletcher JE, Katzen F, Peterson TC, Kudlicki WA, Bench G, Hoeprich PD, Coleman MA. PMID: 18603642.
      View in: PubMed   Mentions: 37     Fields:    Translation:Cells
    49. Insertion of membrane proteins into discoidal membranes using a cell-free protein expression approach. J Proteome Res. 2008 Aug; 7(8):3535-42. Katzen F, Fletcher JE, Yang JP, Kang D, Peterson TC, Cappuccio JA, Blanchette CD, Sulchek T, Chromy BA, Hoeprich PD, Coleman MA, Kudlicki W. PMID: 18557639.
      View in: PubMed   Mentions: 38     Fields:    Translation:Humans
    50. Text-Mining Protein-Protein Interaction Corpus Using Concept Clustering to Identify Intermittency. . 2008 Jun 1; 3634-3640. Leif E. Peterson, Matthew A. Coleman. .
      View in: Publisher Site   Mentions:
    51. Identification of c-type cytochromes involved in anaerobic, bacterial U(IV) oxidation. Biodegradation. 2009 Feb; 20(1):45-53. Beller HR, Legler TC, Bourguet F, Letain TE, Kane SR, Coleman MA. PMID: 18470655.
      View in: PubMed   Mentions: 3     Fields:    Translation:CellsPHPublic Health
    52. Prospective evaluation to establish a dose response for clinical oral mucositis in patients undergoing head-and-neck conformal radiotherapy. Int J Radiat Oncol Biol Phys. 2008 Nov 01; 72(3):756-62. Narayan S, Lehmann J, Coleman MA, Vaughan A, Yang CC, Enepekides D, Farwell G, Purdy JA, Laredo G, Nolan K, Pearson FS, Vijayakumar S. PMID: 18417299.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    53. Quantifying size distributions of nanolipoprotein particles with single-particle analysis and molecular dynamic simulations. J Lipid Res. 2008 Jul; 49(7):1420-30. Blanchette CD, Law R, Benner WH, Pesavento JB, Cappuccio JA, Walsworth V, Kuhn EA, Corzett M, Chromy BA, Segelke BW, Coleman MA, Bench G, Hoeprich PD, Sulchek TA. PMID: 18403317.
      View in: PubMed   Mentions: 15     Fields:    Translation:Cells
    54. Machine learning-based receiver operating characteristic (ROC) curves for crisp and fuzzy classification of DNA microarrays in cancer research. Int J Approx Reason. 2008 Jan; 47(1):17-36. Peterson LE, Coleman MA. PMID: 19079753.
      View in: PubMed   Mentions:
    55. Different apolipoproteins impact nanolipoprotein particle formation. J Am Chem Soc. 2007 Nov 21; 129(46):14348-54. Chromy BA, Arroyo E, Blanchette CD, Bench G, Benner H, Cappuccio JA, Coleman MA, Henderson PT, Hinz AK, Kuhn EA, Pesavento JB, Segelke BW, Sulchek TA, Tarasow T, Walsworth VL, Hoeprich PD. PMID: 17963384.
      View in: PubMed   Mentions: 24     Fields:    Translation:Animals
    56. Applications of functional protein microarrays: identifying protein-protein interactions in an array format. Methods Mol Biol. 2007; 385:121-30. Coleman MA, Beernink PT, Camarero JA, Albala JS. PMID: 18365708.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    57. Whole-genome transcriptional analysis of chemolithoautotrophic thiosulfate oxidation by Thiobacillus denitrificans under aerobic versus denitrifying conditions. J Bacteriol. 2006 Oct; 188(19):7005-15. Beller HR, Letain TE, Chakicherla A, Kane SR, Legler TC, Coleman MA. PMID: 16980503.
      View in: PubMed   Mentions: 17     Fields:    Translation:Cells
    58. Candidate protein biodosimeters of human exposure to ionizing radiation. Int J Radiat Biol. 2006 Sep; 82(9):605-39. Marchetti F, Coleman MA, Jones IM, Wyrobek AJ. PMID: 17050475.
      View in: PubMed   Mentions: 32     Fields:    Translation:HumansPHPublic Health
    59. Selective immobilization of proteins onto solid supports through split-intein-mediated protein trans-splicing. Angew Chem Int Ed Engl. 2006 Mar 03; 45(11):1726-9. Kwon Y, Coleman MA, Camarero JA. PMID: 16470557.
      View in: PubMed   Mentions: 22     Fields:    Translation:Cells
    60. The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans. J Bacteriol. 2006 Feb; 188(4):1473-88. Beller HR, Chain PS, Letain TE, Chakicherla A, Larimer FW, Richardson PM, Coleman MA, Wood AP, Kelly DP. PMID: 16452431.
      View in: PubMed   Mentions: 59     Fields:    Translation:Cells
    61. Low-dose irradiation alters the transcript profiles of human lymphoblastoid cells including genes associated with cytogenetic radioadaptive response. Radiat Res. 2005 Oct; 164(4 Pt 1):369-82. Coleman MA, Yin E, Peterson LE, Nelson D, Sorensen K, Tucker JD, Wyrobek AJ. PMID: 16187739.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    62. Chemoselective attachment of biologically active proteins to surfaces by expressed protein ligation and its application for "protein chip" fabrication. J Am Chem Soc. 2004 Nov 17; 126(45):14730-1. Camarero JA, Kwon Y, Coleman MA. PMID: 15535692.
      View in: PubMed   Mentions: 20     Fields:    Translation:Cells
    63. Temporal global changes in gene expression during temperature transition in Yersinia pestis. J Bacteriol. 2004 Sep; 186(18):6298-305. Motin VL, Georgescu AM, Fitch JP, Gu PP, Nelson DO, Mabery SL, Garnham JB, Sokhansanj BA, Ott LL, Coleman MA, Elliott JM, Kegelmeyer LM, Wyrobek AJ, Slezak TR, Brubaker RR, Garcia E. PMID: 15342600.
      View in: PubMed   Mentions: 60     Fields:    Translation:Cells
    64. High-throughput, fluorescence-based screening for soluble protein expression. J Proteome Res. 2004 Sep-Oct; 3(5):1024-32. Coleman MA, Lao VH, Segelke BW, Beernink PT. PMID: 15473692.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    65. Differential basal expression of genes associated with stress response, damage control, and DNA repair among mouse tissues. Mutat Res. 2004 Jul 11; 561(1-2):1-14. Tomascik-Cheeseman LM, Coleman MA, Marchetti F, Nelson DO, Kegelmeyer LM, Nath J, Wyrobek AJ. PMID: 15238225.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    66. Comparison of multiplexed techniques for detection of bacterial and viral proteins. J Proteome Res. 2004 Jul-Aug; 3(4):736-42. Rao RS, Visuri SR, McBride MT, Albala JS, Matthews DL, Coleman MA. PMID: 15359726.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    67. Laboratory scale structural genomics. J Struct Funct Genomics. 2004; 5(1-2):147-57. Segelke BW, Schafer J, Coleman MA, Lekin TP, Toppani D, Skowronek KJ, Kantardjieff KA, Rupp B. PMID: 15263853.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    68. Identification of chromatin-related protein interactions using protein microarrays. Proteomics. 2003 Nov; 3(11):2101-7. Coleman MA, Miller KA, Beernink PT, Yoshikawa DM, Albala JS. PMID: 14595808.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    69. Gene expression changes in mouse brain after exposure to low-dose ionizing radiation. Int J Radiat Biol. 2003 Oct; 79(10):759-75. Yin E, Nelson DO, Coleman MA, Peterson LE, Wyrobek AJ. PMID: 14630535.
      View in: PubMed   Mentions: 46     Fields:    Translation:AnimalsCells
    70. A Modeling and Execution Environment for Distributed Scientific Workflows* *Georgia Institute of Technology, †Lawrence Berkeley Laboratory (LBL), ‡Lawrence Livermore National Laboratory (LLNL), +North Carolina State University (NCSU), #San Diego Supercomputer Center (SDSC). This work was supported by DOE LLNL contract No. W-7405-Eng-48, and SciDAC/SDM contract No. DE-FC02–01ER25486. . 2003 Jan 1; 1-4. Ilkay Altintas, Sangeeta Bhagwanani, David Buttler, Sandeep Chandra+, Zhengang Cheng+, Matthew A. Coleman, Terence Critchlow, Amarnath Gupta, Wei Han, Ling Liu, Bertram Ludäscher, Calton Pu, Reagan Moore, Arie Shoshani, Mladen Vouk. .
      View in: Publisher Site   Mentions:
    71. Application of In Vitro Protein Expression to Human Prote. ScientificWorldJournal. 2002; 2:73-74. Beernink PT, Krupka SS, Lao V, Martin G, Coleman MA. PMID: 29973809.
      View in: PubMed   Mentions:    Fields:    
    72. Functional characterization of Ape1 variants identified in the human population. Nucleic Acids Res. 2000 Oct 15; 28(20):3871-9. Hadi MZ, Coleman MA, Fidelis K, Mohrenweiser HW, Wilson DM. PMID: 11024165.
      View in: PubMed   Mentions: 68     Fields:    Translation:HumansCells
    73. Cloning and characterization of HARP/SMARCAL1: a prokaryotic HepA-related SNF2 helicase protein from human and mouse. Genomics. 2000 May 01; 65(3):274-82. Coleman MA, Eisen JA, Mohrenweiser HW. PMID: 10857751.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansAnimalsCells
    74. Hex1: a new human Rad2 nuclease family member with homology to yeast exonuclease 1. Nucleic Acids Res. 1998 Aug 15; 26(16):3762-8. Wilson DM, Carney JP, Coleman MA, Adamson AW, Christensen M, Lamerdin JE. PMID: 9685493.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansAnimalsCells
    75. Detection of threonine structural changes upon formation of the M-intermediate of bacteriorhodopsin: evidence for assignment to Thr-89. Biochim Biophys Acta. 1998 Jul 20; 1365(3):363-72. Liu X, Lee MJ, Coleman M, Rath P, Nilsson A, Fischer WB, Bizounok M, Herzfeld J, Karstens WF, Raap J, Lugtenburg J, Rothschild KJ. PMID: 9711293.
      View in: PubMed   Mentions: 2     Fields:    
    76. Human calcium-activated potassium channel gene KCNN4 maps to chromosome 19q13.2 in the region deleted in diamond-blackfan anemia. Genomics. 1998 Jul 01; 51(1):160-1. Ghanshani S, Coleman M, Gustavsson P, Wu AC, Gargus JJ, Gutman GA, Dahl N, Mohrenweiser H, Chandy KG. PMID: 9693050.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    77. Threonine-89 participates in the active site of bacteriorhodopsin: evidence for a role in color regulation and Schiff base proton transfer. Biochemistry. 1997 Jun 17; 36(24):7490-7. Russell TS, Coleman M, Rath P, Nilsson A, Rothschild KJ. PMID: 9200698.
      View in: PubMed   Mentions: 3     Fields:    Translation:Cells
    78. Protein conformational changes during the bacteriorhodopsin photocycle. A Fourier transform infrared/resonance Raman study of the alkaline form of the mutant Asp-85-->Asn. J Biol Chem. 1995 Dec 15; 270(50):29746-51. Nilsson A, Rath P, Olejnik J, Coleman M, Rothschild KJ. PMID: 8530365.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    79. Asp 46 can substitute Asp 96 as the Schiff base proton donor in bacteriorhodopsin. Biochemistry. 1995 Nov 28; 34(47):15599-606. Coleman M, Nilsson A, Russell TS, Rath P, Pandey R, Rothschild KJ. PMID: 7492563.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    80. Site-directed isotope labeling and FTIR spectroscopy: assignment of tyrosine bands in the bR-->M difference spectrum of bacteriorhodopsin. Biophys Chem. 1995 Sep-Oct; 56(1-2):63-70. Liu XM, Sonar S, Lee CP, Coleman M, RajBhandary UL, Rothschild KJ. PMID: 7662870.
      View in: PubMed   Mentions: 8     Fields:    Translation:Cells
    81. Site-directed isotope labeling and ATR-FTIR difference spectroscopy of bacteriorhodopsin: the peptide carbonyl group of Tyr 185 is structurally active during the bR-->N transition. Biochemistry. 1995 Jan 10; 34(1):2-6. Ludlam CF, Sonar S, Lee CP, Coleman M, Herzfeld J, RajBhandary UL, Rothschild KJ. PMID: 7819197.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
    82. A redirected proton pathway in the bacteriorhodopsin mutant Tyr-57-->Asp. Evidence for proton translocation without Schiff base deprotonation. J Biol Chem. 1994 Nov 18; 269(46):28851-8. Sonar S, Marti T, Rath P, Fischer W, Coleman M, Nilsson A, Khorana HG, Rothschild KJ. PMID: 7961844.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    83. Site-directed isotope labelling and FTIR spectroscopy of bacteriorhodopsin. Nat Struct Biol. 1994 Aug; 1(8):512-7. Sonar S, Lee CP, Coleman M, Patel N, Liu X, Marti T, Khorana HG, RajBhandary UL, Rothschild KJ. PMID: 7664078.
      View in: PubMed   Mentions: 12     Fields:    Translation:Cells
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