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Richard W Michelmore

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InstitutionUniversity of California Davis
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Kitazaki K, Fukushima A, Nakabayashi R, Okazaki Y, Kobayashi M, Mori T, Nishizawa T, Reyes-Chin-Wo S, Michelmore R, Saito K, Shoji K, Kusano M. Metabolic Reprogramming in Leaf Lettuce Grown Under Different Light Quality and Intensity Conditions Using Narrow-Band LEDs. Sci Rep. 2018 May 21; 8(1):7914. PMID: 29784957.
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    2. Bertier LD, Ron M, Huo H, Bradford KJ, Britt AB, Michelmore R. High-Resolution Analysis of the Efficiency, Heritability, and Editing Outcomes of CRISPR/Cas9-Induced Modifications of NCED4 in Lettuce (Lactuca sativa). G3 (Bethesda). 2018 May 04; 8(5):1513-1521. PMID: 29511025.
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    3. Simko I, Hayes RJ, Truco MJ, Michelmore R, Antonise R, Massoudi M. Molecular markers reliably predict post-harvest deterioration of fresh-cut lettuce in modified atmosphere packaging. Hortic Res. 2018; 5:21. PMID: 29619232.
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    4. Zhang L, Su W, Tao R, Zhang W, Chen J, Wu P, Yan C, Jia Y, Larkin RM, Lavelle D, Truco MJ, Chin-Wo SR, Michelmore R, Kuang H. RNA sequencing provides insights into the evolution of lettuce and the regulation of flavonoid biosynthesis. Nat Commun. 2017 Dec 22; 8(1):2264. PMID: 29273740.
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    5. Michelmore R, Coaker G, Bart R, Beattie G, Bent A, Bruce T, Cameron D, Dangl J, Dinesh-Kumar S, Edwards R, Eves-van den Akker S, Gassmann W, Greenberg JT, Hanley-Bowdoin L, Harrison RJ, Harvey J, He P, Huffaker A, Hulbert S, Innes R, Jones JDG, Kaloshian I, Kamoun S, Katagiri F, Leach J, Ma W, McDowell J, Medford J, Meyers B, Nelson R, Oliver R, Qi Y, Saunders D, Shaw M, Smart C, Subudhi P, Torrance L, Tyler B, Valent B, Walsh J. Foundational and Translational Research Opportunities to Improve Plant Health. Mol Plant Microbe Interact. 2017 Jul; 30(7):515-516. PMID: 28398839.
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    6. Reyes-Chin-Wo S, Wang Z, Yang X, Kozik A, Arikit S, Song C, Xia L, Froenicke L, Lavelle DO, Truco MJ, Xia R, Zhu S, Xu C, Xu H, Xu X, Cox K, Korf I, Meyers BC, Michelmore R. Genome assembly with in vitro proximity ligation data and whole-genome triplication in lettuce. Nat Commun. 2017 Apr 12; 8:14953. PMID: 28401891.
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    7. Kunjeti SG, Anchieta A, Martin FN, Choi YJ, Thines M, Michelmore R, Koike ST, Tsuchida C, Mahaffee W, Subbarao KV, Klosterman SJ. Detection and Quantification of Bremia lactucae by Spore Trapping and Quantitative PCR. Phytopathology. 2016 11; 106(11):1426-1437. PMID: 27392175.
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    8. Scaglione D, Reyes-Chin-Wo S, Acquadro A, Froenicke L, Portis E, Beitel C, Tirone M, Mauro R, Lo Monaco A, Mauromicale G, Faccioli P, Cattivelli L, Rieseberg L, Michelmore R, Lanteri S. Corrigendum: The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny. Sci Rep. 2016 05 23; 6:25323. PMID: 27212460; PMCID: PMC4876515.
    9. Bertioli DJ, Cannon SB, Froenicke L, Huang G, Farmer AD, Cannon EK, Liu X, Gao D, Clevenger J, Dash S, Ren L, Moretzsohn MC, Shirasawa K, Huang W, Vidigal B, Abernathy B, Chu Y, Niederhuth CE, Umale P, Araújo AC, Kozik A, Kim KD, Burow MD, Varshney RK, Wang X, Zhang X, Barkley N, Guimarães PM, Isobe S, Guo B, Liao B, Stalker HT, Schmitz RJ, Scheffler BE, Leal-Bertioli SC, Xun X, Jackson SA, Michelmore R, Ozias-Akins P. The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut. Nat Genet. 2016 Apr; 48(4):438-46. PMID: 26901068.
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    10. Scaglione D, Reyes-Chin-Wo S, Acquadro A, Froenicke L, Portis E, Beitel C, Tirone M, Mauro R, Lo Monaco A, Mauromicale G, Faccioli P, Cattivelli L, Rieseberg L, Michelmore R, Lanteri S. The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny. Sci Rep. 2016 Jan 20; 6:19427. PMID: 26786968; PMCID: PMC4726258.
    11. Damerum A, Selmes SL, Biggi GF, Clarkson GJ, Rothwell SD, Truco MJ, Michelmore R, Hancock RD, Shellcock C, Chapman MA, Taylor G. Elucidating the genetic basis of antioxidant status in lettuce (Lactuca sativa). Hortic Res. 2015; 2:15055. PMID: 26640696; PMCID: PMC4660231.
    12. Yoong FY, O'Brien LK, Truco MJ, Huo H, Sideman R, Hayes R, Michelmore R, Bradford KJ. Genetic Variation for Thermotolerance in Lettuce Seed Germination Is Associated with Temperature-Sensitive Regulation of ETHYLENE RESPONSE FACTOR1 (ERF1). Plant Physiol. 2016 Jan; 170(1):472-88. PMID: 26574598; PMCID: PMC4704578.
    13. Lee J, Manning AJ, Wolfgeher D, Jelenska J, Cavanaugh KA, Xu H, Fernandez SM, Michelmore R, Kron SJ, Greenberg JT. Acetylation of an NB-LRR Plant Immune-Effector Complex Suppresses Immunity. Cell Rep. 2015 Nov 24; 13(8):1670-82. PMID: 26586425; PMCID: PMC4967551.
    14. Derevnina L, Chin-Wo-Reyes S, Martin F, Wood K, Froenicke L, Spring O, Michelmore R. Genome Sequence and Architecture of the Tobacco Downy Mildew Pathogen Peronospora tabacina. Mol Plant Microbe Interact. 2015 Nov; 28(11):1198-215. PMID: 26196322.
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    15. Christopoulou M, Wo SR, Kozik A, McHale LK, Truco MJ, Wroblewski T, Michelmore R. Genome-Wide Architecture of Disease Resistance Genes in Lettuce. G3 (Bethesda). 2015 Oct 08; 5(12):2655-69. PMID: 26449254; PMCID: PMC4683639.
    16. Hill T, Ashrafi H, Chin-Wo SR, Stoffel K, Truco MJ, Kozik A, Michelmore R, Van Deynze A. Ultra-High Density, Transcript-Based Genetic Maps of Pepper Define Recombination in the Genome and Synteny Among Related Species. G3 (Bethesda). 2015 Sep 08; 5(11):2341-55. PMID: 26355020; PMCID: PMC4632054.
    17. Simko I, Ochoa OE, Pel MA, Tsuchida C, Font I Forcada C, Hayes RJ, Truco MJ, Antonise R, Galeano CH, Michelmore R. Resistance to Downy Mildew in Lettuce 'La Brillante' is Conferred by Dm50 Gene and Multiple QTL. Phytopathology. 2015 Sep; 105(9):1220-8. PMID: 25915441.
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    18. Christopoulou M, McHale LK, Kozik A, Reyes-Chin Wo S, Wroblewski T, Michelmore R. Dissection of Two Complex Clusters of Resistance Genes in Lettuce (Lactuca sativa). Mol Plant Microbe Interact. 2015 Jul; 28(7):751-65. PMID: 25650829.
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    19. Derevnina L, Michelmore R. Wheat rusts never sleep but neither do sequencers: will pathogenomics transform the way plant diseases are managed? Genome Biol. 2015 Mar 02; 16:44. PMID: 25853180; PMCID: PMC4346120.
    20. Hayes RJ, Trent MA, Truco MJ, Antonise R, Michelmore R, Bull CT. The inheritance of resistance to bacterial leaf spot of lettuce caused by Xanthomonas campestris pv. vitians in three lettuce cultivars. Hortic Res. 2014; 1:14066. PMID: 26504558; PMCID: PMC4596331.
    21. Govindarajulu M, Epstein L, Wroblewski T, Michelmore R. Host-induced gene silencing inhibits the biotrophic pathogen causing downy mildew of lettuce. Plant Biotechnol J. 2015 Sep; 13(7):875-83. PMID: 25487781.
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    22. Wroblewski T, Matvienko M, Piskurewicz U, Xu H, Martineau B, Wong J, Govindarajulu M, Kozik A, Michelmore R. Distinctive profiles of small RNA couple inverted repeat-induced post-transcriptional gene silencing with endogenous RNA silencing pathways in Arabidopsis. RNA. 2014 Dec; 20(12):1987-99. PMID: 25344399; PMCID: PMC4238362.
    23. Muñoz-Bodnar A, Perez-Quintero AL, Gomez-Cano F, Gil J, Michelmore R, Bernal A, Szurek B, Lopez C. RNAseq analysis of cassava reveals similar plant responses upon infection with pathogenic and non-pathogenic strains of Xanthomonas axonopodis pv. manihotis. Plant Cell Rep. 2014 Nov; 33(11):1901-12. PMID: 25120000.
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    24. Beitel CW, Froenicke L, Lang JM, Korf IF, Michelmore R, Eisen JA, Darling AE. Strain- and plasmid-level deconvolution of a synthetic metagenome by sequencing proximity ligation products. PeerJ. 2014; 2:e415. PMID: 24918035; PMCID: PMC4045339.
    25. Hartman Y, Hooftman DA, Uwimana B, Schranz ME, van de Wiel CC, Smulders MJ, Visser RG, Michelmore R, van Tienderen PH. Abiotic stress QTL in lettuce crop-wild hybrids: comparing greenhouse and field experiments. Ecol Evol. 2014 Jun; 4(12):2395-409. PMID: 25360276; PMCID: PMC4203288.
    26. Mandel JR, Dikow RB, Funk VA, Masalia RR, Staton SE, Kozik A, Michelmore R, Rieseberg LH, Burke JM. A target enrichment method for gathering phylogenetic information from hundreds of loci: An example from the Compositae. Appl Plant Sci. 2014 Feb; 2(2). PMID: 25202605; PMCID: PMC4103609.
    27. Pearl SA, Bowers JE, Reyes-Chin-Wo S, Michelmore R, Burke JM. Genetic analysis of safflower domestication. BMC Plant Biol. 2014 Feb 06; 14:43. PMID: 24502326; PMCID: PMC3925122.
    28. Atkinson LD, McHale LK, Truco MJ, Hilton HW, Lynn J, Schut JW, Michelmore R, Hand P, Pink DA. An intra-specific linkage map of lettuce (Lactuca sativa) and genetic analysis of postharvest discolouration traits. Theor Appl Genet. 2013 Nov; 126(11):2737-52. PMID: 23959526.
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    29. Simko I, Atallah AJ, Ochoa OE, Antonise R, Galeano CH, Truco MJ, Michelmore R. Identification of QTLs conferring resistance to downy mildew in legacy cultivars of lettuce. Sci Rep. 2013 Oct 07; 3:2875. PMID: 24096732; PMCID: PMC3791445.
    30. Jenni S, Truco MJ, Michelmore R. Quantitative trait loci associated with tipburn, heat stress-induced physiological disorders, and maturity traits in crisphead lettuce. Theor Appl Genet. 2013 Sep 28. PMID: 24078012.
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    31. Hodgins KA, Lai Z, Oliveira LO, Still DW, Scascitelli M, Barker MS, Kane NC, Dempewolf H, Kozik A, Kesseli RV, Burke JM, Michelmore R, Rieseberg LH. Genomics of Compositae crops: reference transcriptome assemblies and evidence of hybridization with wild relatives. Mol Ecol Resour. 2014 Jan; 14(1):166-77. PMID: 24103297.
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    32. Nandety RS, Caplan JL, Cavanaugh K, Perroud B, Wroblewski T, Michelmore R, Meyers BC. The role of TIR-NBS and TIR-X proteins in plant basal defense responses. Plant Physiol. 2013 Jul; 162(3):1459-72. PMID: 23735504; PMCID: PMC3707564.
    33. Michelmore R, Christopoulou M, Caldwell KS. Impacts of resistance gene genetics, function, and evolution on a durable future. Annu Rev Phytopathol. 2013; 51:291-319. PMID: 23682913.
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    34. De Cremer K, Mathys J, Vos C, Froenicke L, Michelmore R, Cammue BP, De Coninck B. RNAseq-based transcriptome analysis of Lactuca sativa infected by the fungal necrotroph Botrytis cinerea. Plant Cell Environ. 2013 Nov; 36(11):1992-2007. PMID: 23534608.
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    35. Truco MJ, Ashrafi H, Kozik A, van Leeuwen H, Bowers J, Wo SR, Stoffel K, Xu H, Hill T, Van Deynze A, Michelmore R. An Ultra-High-Density, Transcript-Based, Genetic Map of Lettuce. G3 (Bethesda). 2013 04 09; 3(4):617-631. PMID: 23550116.
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    36. Matvienko M, Kozik A, Froenicke L, Lavelle D, Martineau B, Perroud B, Michelmore R. Consequences of normalizing transcriptomic and genomic libraries of plant genomes using a duplex-specific nuclease and tetramethylammonium chloride. PLoS One. 2013; 8(2):e55913. PMID: 23409088; PMCID: PMC3568094.
    37. Hill TA, Ashrafi H, Reyes-Chin-Wo S, Yao J, Stoffel K, Truco MJ, Kozik A, Michelmore R, Van Deynze A. Characterization of Capsicum annuum genetic diversity and population structure based on parallel polymorphism discovery with a 30K unigene Pepper GeneChip. PLoS One. 2013; 8(2):e56200. PMID: 23409153.
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    38. Uwimana B, Smulders MJ, Hooftman DA, Hartman Y, van Tienderen PH, Jansen J, McHale LK, Michelmore R, van de Wiel CC, Visser RG. Hybridization between crops and wild relatives: the contribution of cultivated lettuce to the vigour of crop-wild hybrids under drought, salinity and nutrient deficiency conditions. Theor Appl Genet. 2012 Oct; 125(6):1097-111. PMID: 22660630; PMCID: PMC3442173.
    39. Stoffel K, van Leeuwen H, Kozik A, Caldwell D, Ashrafi H, Cui X, Tan X, Hill T, Reyes-Chin-Wo S, Truco MJ, Michelmore R, Van Deynze A. Development and application of a 6.5 million feature Affymetrix Genechip® for massively parallel discovery of single position polymorphisms in lettuce (Lactuca spp.). BMC Genomics. 2012 May 14; 13:185. PMID: 22583801; PMCID: PMC3490809.
    40. Uwimana B, Smulders MJ, Hooftman DA, Hartman Y, van Tienderen PH, Jansen J, McHale LK, Michelmore R, Visser RG, van de Wiel CC. Crop to wild introgression in lettuce: following the fate of crop genome segments in backcross populations. BMC Plant Biol. 2012 Mar 26; 12:43. PMID: 22448748; PMCID: PMC3384248.
    41. Lee J, Teitzel GM, Munkvold K, del Pozo O, Martin GB, Michelmore R, Greenberg JT. Type III secretion and effectors shape the survival and growth pattern of Pseudomonas syringae on leaf surfaces. Plant Physiol. 2012 Apr; 158(4):1803-18. PMID: 22319072; PMCID: PMC3320187.
    42. Pandey MK, Monyo E, Ozias-Akins P, Liang X, Guimarães P, Nigam SN, Upadhyaya HD, Janila P, Zhang X, Guo B, Cook DR, Bertioli DJ, Michelmore R, Varshney RK. Advances in Arachis genomics for peanut improvement. Biotechnol Adv. 2012 May-Jun; 30(3):639-51. PMID: 22094114.
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    43. Lai Z, Kane NC, Kozik A, Hodgins KA, Dlugosch KM, Barker MS, Matvienko M, Yu Q, Turner KG, Pearl SA, Bell GD, Zou Y, Grassa C, Guggisberg A, Adams KL, Anderson JV, Horvath DP, Kesseli RV, Burke JM, Michelmore R, Rieseberg LH. Genomics of Compositae weeds: EST libraries, microarrays, and evidence of introgression. Am J Bot. 2012 Feb; 99(2):209-18. PMID: 22058181.
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    44. Cantu D, Govindarajulu M, Kozik A, Wang M, Chen X, Kojima KK, Jurka J, Michelmore R, Dubcovsky J. Next generation sequencing provides rapid access to the genome of Puccinia striiformis f. sp. tritici, the causal agent of wheat stripe rust. PLoS One. 2011; 6(8):e24230. PMID: 21909385; PMCID: PMC3164196.
    45. Hayes RJ, McHale LK, Vallad GE, Truco MJ, Michelmore R, Klosterman SJ, Maruthachalam K, Subbarao KV. The inheritance of resistance to Verticillium wilt caused by race 1 isolates of Verticillium dahliae in the lettuce cultivar La Brillante. Theor Appl Genet. 2011 Aug; 123(4):509-17. PMID: 21567237.
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    46. Strasburg JL, Kane NC, Raduski AR, Bonin A, Michelmore R, Rieseberg LH. Effective population size is positively correlated with levels of adaptive divergence among annual sunflowers. Mol Biol Evol. 2011 May; 28(5):1569-80. PMID: 20952500; PMCID: PMC3080132.
    47. Argyris J, Truco MJ, Ochoa O, McHale L, Dahal P, Van Deynze A, Michelmore R, Bradford KJ. A gene encoding an abscisic acid biosynthetic enzyme (LsNCED4) collocates with the high temperature germination locus Htg6.1 in lettuce (Lactuca sp.). Theor Appl Genet. 2011 Jan; 122(1):95-108. PMID: 20703871; PMCID: PMC3015190.
    48. Cantu D, Vanzetti LS, Sumner A, Dubcovsky M, Matvienko M, Distelfeld A, Michelmore R, Dubcovsky J. Small RNAs, DNA methylation and transposable elements in wheat. BMC Genomics. 2010 Jun 29; 11:408. PMID: 20584339; PMCID: PMC2996936.
    49. Cui X, You N, Girke T, Michelmore R, Van Deynze A. Single feature polymorphism detection using recombinant inbred line microarray expression data. Bioinformatics. 2010 Aug 15; 26(16):1983-9. PMID: 20576626.
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    50. Simko I, Pechenick DA, McHale LK, Truco MJ, Ochoa OE, Michelmore R, Scheffler BE. Association mapping and marker-assisted selection of the lettuce dieback resistance gene Tvr1. BMC Plant Biol. 2009 Nov 23; 9:135. PMID: 19930659; PMCID: PMC2789080.
    51. Ferrante P, Clarke CR, Cavanaugh KA, Michelmore R, Buonaurio R, Vinatzer BA. Contributions of the effector gene hopQ1-1 to differences in host range between Pseudomonas syringae pv. phaseolicola and P. syringae pv. tabaci. Mol Plant Pathol. 2009 Nov; 10(6):837-42. PMID: 19849789.
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    52. Jeuken MJ, Zhang NW, McHale LK, Pelgrom K, den Boer E, Lindhout P, Michelmore R, Visser RG, Niks RE. Rin4 causes hybrid necrosis and race-specific resistance in an interspecific lettuce hybrid. Plant Cell. 2009 Oct; 21(10):3368-78. PMID: 19855048; PMCID: PMC2782268.
    53. Chapman MA, Hvala J, Strever J, Matvienko M, Kozik A, Michelmore R, Tang S, Knapp SJ, Burke JM. Development, polymorphism, and cross-taxon utility of EST-SSR markers from safflower (Carthamus tinctorius L.). Theor Appl Genet. 2009 Dec; 120(1):85-91. PMID: 19820913.
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    54. Luo Y, Caldwell KS, Wroblewski T, Wright ME, Michelmore R. Proteolysis of a negative regulator of innate immunity is dependent on resistance genes in tomato and Nicotiana benthamiana and induced by multiple bacterial effectors. Plant Cell. 2009 Aug; 21(8):2458-72. PMID: 19671880; PMCID: PMC2751963.
    55. Wroblewski T, Caldwell KS, Piskurewicz U, Cavanaugh KA, Xu H, Kozik A, Ochoa O, McHale LK, Lahre K, Jelenska J, Castillo JA, Blumenthal D, Vinatzer BA, Greenberg JT, Michelmore R. Comparative large-scale analysis of interactions between several crop species and the effector repertoires from multiple pathovars of Pseudomonas and Ralstonia. Plant Physiol. 2009 Aug; 150(4):1733-49. PMID: 19571308.
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    56. Caldwell KS, Michelmore R. Arabidopsis thaliana genes encoding defense signaling and recognition proteins exhibit contrasting evolutionary dynamics. Genetics. 2009 Feb; 181(2):671-84. PMID: 19064707; PMCID: PMC2644955.
    57. McHale LK, Truco MJ, Kozik A, Wroblewski T, Ochoa OE, Lahre KA, Knapp SJ, Michelmore R. The genomic architecture of disease resistance in lettuce. Theor Appl Genet. 2009 Feb; 118(3):565-80. PMID: 19005638.
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    58. Pignatta D, Dilkes B, Wroblewski T, Michelmore R, Comai L. Transgene-induced gene silencing is not affected by a change in ploidy level. PLoS One. 2008 Aug 26; 3(8):e3061. PMID: 18725969; PMCID: PMC2516530.
    59. Barker MS, Kane NC, Matvienko M, Kozik A, Michelmore R, Knapp SJ, Rieseberg LH. Multiple paleopolyploidizations during the evolution of the Compositae reveal parallel patterns of duplicate gene retention after millions of years. Mol Biol Evol. 2008 Nov; 25(11):2445-55. PMID: 18728074; PMCID: PMC2727391.
    60. Tomilov AA, Tomilova NB, Wroblewski T, Michelmore R, Yoder JI. Trans-specific gene silencing between host and parasitic plants. Plant J. 2008 Nov; 56(3):389-97. PMID: 18643992.
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    61. Radwan O, Gandhi S, Heesacker A, Whitaker B, Taylor C, Plocik A, Kesseli R, Kozik A, Michelmore R, Knapp SJ. Genetic diversity and genomic distribution of homologs encoding NBS-LRR disease resistance proteins in sunflower. Mol Genet Genomics. 2008 Aug; 280(2):111-25. PMID: 18553106.
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    62. Adams-Phillips L, Wan J, Tan X, Dunning FM, Meyers BC, Michelmore R, Bent AF. Discovery of ADP-ribosylation and other plant defense pathway elements through expression profiling of four different Arabidopsis-Pseudomonas R-avr interactions. Mol Plant Microbe Interact. 2008 May; 21(5):646-57. PMID: 18393624.
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    63. Kuang H, van Eck HJ, Sicard D, Michelmore R, Nevo E. Evolution and genetic population structure of prickly lettuce (Lactuca serriola) and its RGC2 resistance gene cluster. Genetics. 2008 Mar; 178(3):1547-58. PMID: 18385115; PMCID: PMC2278093.
    64. Kuang H, Caldwell KS, Meyers BC, Michelmore R. Frequent sequence exchanges between homologs of RPP8 in Arabidopsis are not necessarily associated with genomic proximity. Plant J. 2008 Apr; 54(1):69-80. PMID: 18182023.
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    65. Chen J, Agrawal V, Rattray M, West MA, St Clair DA, Michelmore R, Coughlan SJ, Meyers BC. A comparison of microarray and MPSS technology platforms for expression analysis of Arabidopsis. BMC Genomics. 2007 Nov 12; 8:414. PMID: 17997849; PMCID: PMC2190774.
    66. Tan X, Meyers BC, Kozik A, West MA, Morgante M, St Clair DA, Bent AF, Michelmore R. Global expression analysis of nucleotide binding site-leucine rich repeat-encoding and related genes in Arabidopsis. BMC Plant Biol. 2007 Oct 23; 7:56. PMID: 17956627; PMCID: PMC2175511.
    67. van Leeuwen H, Kliebenstein DJ, West MA, Kim K, van Poecke R, Katagiri F, Michelmore R, Doerge RW, St Clair DA. Natural variation among Arabidopsis thaliana accessions for transcriptome response to exogenous salicylic acid. Plant Cell. 2007 Jul; 19(7):2099-110. PMID: 17630278; PMCID: PMC1955704.
    68. Wroblewski T, Piskurewicz U, Tomczak A, Ochoa O, Michelmore R. Silencing of the major family of NBS-LRR-encoding genes in lettuce results in the loss of multiple resistance specificities. Plant J. 2007 Sep; 51(5):803-18. PMID: 17587302.
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    69. Zhang FZ, Wagstaff C, Rae AM, Sihota AK, Keevil CW, Rothwell SD, Clarkson GJ, Michelmore R, Truco MJ, Dixon MS, Taylor G. QTLs for shelf life in lettuce co-locate with those for leaf biophysical properties but not with those for leaf developmental traits. J Exp Bot. 2007; 58(6):1433-49. PMID: 17347132.
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    70. Church SA, Livingstone K, Lai Z, Kozik A, Knapp SJ, Michelmore R, Rieseberg LH. Using variable rate models to identify genes under selection in sequence pairs: their validity and limitations for EST sequences. J Mol Evol. 2007 Feb; 64(2):171-80. PMID: 17200807.
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    71. Rose LE, Michelmore R, Langley CH. Natural variation in the Pto disease resistance gene within species of wild tomato (Lycopersicon). II. Population genetics of Pto. Genetics. 2007 Mar; 175(3):1307-19. PMID: 17179076; PMCID: PMC1840093.
    72. West MA, Kim K, Kliebenstein DJ, van Leeuwen H, Michelmore R, Doerge RW, St Clair DA. Global eQTL mapping reveals the complex genetic architecture of transcript-level variation in Arabidopsis. Genetics. 2007 Mar; 175(3):1441-50. PMID: 17179097; PMCID: PMC1840073.
    73. Bushman BS, Scholte AA, Cornish K, Scott DJ, Brichta JL, Vederas JC, Ochoa O, Michelmore R, Shintani DK, Knapp SJ. Identification and comparison of natural rubber from two Lactuca species. Phytochemistry. 2006 Dec; 67(23):2590-6. PMID: 17055543.
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    74. Timms L, Jimenez R, Chase M, Lavelle D, McHale L, Kozik A, Lai Z, Heesacker A, Knapp S, Rieseberg L, Michelmore R, Kesseli R. Analyses of synteny between Arabidopsis thaliana and species in the Asteraceae reveal a complex network of small syntenic segments and major chromosomal rearrangements. Genetics. 2006 Aug; 173(4):2227-35. PMID: 16783026; PMCID: PMC1569713.
    75. Kuang H, Ochoa OE, Nevo E, Michelmore R. The disease resistance gene Dm3 is infrequent in natural populations of Lactuca serriola due to deletions and frequent gene conversions at the RGC2 locus. Plant J. 2006 Jul; 47(1):38-48. PMID: 16762035.
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    76. West MA, van Leeuwen H, Kozik A, Kliebenstein DJ, Doerge RW, St Clair DA, Michelmore R. High-density haplotyping with microarray-based expression and single feature polymorphism markers in Arabidopsis. Genome Res. 2006 Jun; 16(6):787-95. PMID: 16702412; PMCID: PMC1473188.
    77. McHale L, Tan X, Koehl P, Michelmore R. Plant NBS-LRR proteins: adaptable guards. Genome Biol. 2006; 7(4):212. PMID: 16677430; PMCID: PMC1557992.
    78. Argyris J, Truco MJ, Ochoa O, Knapp SJ, Still DW, Lenssen GM, Schut JW, Michelmore R, Bradford KJ. Quantitative trait loci associated with seed and seedling traits in Lactuca. Theor Appl Genet. 2005 Nov; 111(7):1365-76. PMID: 16177902.
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    79. Kliebenstein DJ, West MA, van Leeuwen H, Kim K, Doerge RW, Michelmore R, St Clair DA. Genomic survey of gene expression diversity in Arabidopsis thaliana. Genetics. 2006 Feb; 172(2):1179-89. PMID: 16204207; PMCID: PMC1456216.
    80. Rose LE, Langley CH, Bernal AJ, Michelmore R. Natural variation in the Pto pathogen resistance gene within species of wild tomato (Lycopersicon). I. Functional analysis of Pto alleles. Genetics. 2005 Sep; 171(1):345-57. PMID: 15944360; PMCID: PMC1456525.
    81. Bernal AJ, Pan Q, Pollack J, Rose L, Kozik A, Willits N, Luo Y, Guittet M, Kochetkova E, Michelmore R. Functional analysis of the plant disease resistance gene Pto using DNA shuffling. J Biol Chem. 2005 Jun 17; 280(24):23073-83. PMID: 15790558.
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    82. Wroblewski T, Tomczak A, Michelmore R. Optimization of Agrobacterium-mediated transient assays of gene expression in lettuce, tomato and Arabidopsis. Plant Biotechnol J. 2005 Mar; 3(2):259-73. PMID: 17173625.
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    83. Kuang H, Woo SS, Meyers BC, Nevo E, Michelmore R. Multiple genetic processes result in heterogeneous rates of evolution within the major cluster disease resistance genes in lettuce. Plant Cell. 2004 Nov; 16(11):2870-94. PMID: 15494555; PMCID: PMC527186.
    84. Rose LE, Bittner-Eddy PD, Langley CH, Holub EB, Michelmore R, Beynon JL. The maintenance of extreme amino acid diversity at the disease resistance gene, RPP13, in Arabidopsis thaliana. Genetics. 2004 Mar; 166(3):1517-27. PMID: 15082565; PMCID: PMC1470773.
    85. Moreno-Vázquez S, Ochoa OE, Faber N, Chao S, Jacobs JM, Maisonneuve B, Kesseli RV, Michelmore R. SNP-based codominant markers for a recessive gene conferring resistance to corky root rot (Rhizomonas suberifaciens) in lettuce (Lactuca sativa). Genome. 2003 Dec; 46(6):1059-69. PMID: 14663524.
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    86. Cannon SB, Kozik A, Chan B, Michelmore R, Young ND. DiagHunter and GenoPix2D: programs for genomic comparisons, large-scale homology discovery and visualization. Genome Biol. 2003; 4(10):R68. PMID: 14519203; PMCID: PMC328457.
    87. Michelmore R. The impact zone: genomics and breeding for durable disease resistance. Curr Opin Plant Biol. 2003 Aug; 6(4):397-404. PMID: 12873536.
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    88. Sicard D, Legg E, Brown S, Babu NK, Ochoa O, Sudarshana P, Michelmore R. A genetic map of the lettuce downy mildew pathogen, Bremia lactucae, constructed from molecular markers and avirulence genes. Fungal Genet Biol. 2003 Jun; 39(1):16-30. PMID: 12742060.
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    89. Meyers BC, Kozik A, Griego A, Kuang H, Michelmore R. Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis. Plant Cell. 2003 Apr; 15(4):809-34. PMID: 12671079; PMCID: PMC152331.
    90. Meyers BC, Morgante M, Michelmore R. TIR-X and TIR-NBS proteins: two new families related to disease resistance TIR-NBS-LRR proteins encoded in Arabidopsis and other plant genomes. Plant J. 2002 Oct; 32(1):77-92. PMID: 12366802.
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    91. Mondragón-Palomino M, Meyers BC, Michelmore R, Gaut BS. Patterns of positive selection in the complete NBS-LRR gene family of Arabidopsis thaliana. Genome Res. 2002 Sep; 12(9):1305-15. PMID: 12213767; PMCID: PMC186657.
    92. Shen KA, Chin DB, Arroyo-Garcia R, Ochoa OE, Lavelle DO, Wroblewski T, Meyers BC, Michelmore R. Dm3 is one member of a large constitutively expressed family of nucleotide binding site-leucine-rich repeat encoding genes. Mol Plant Microbe Interact. 2002 Mar; 15(3):251-61. PMID: 11952128.
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    93. Chang JH, Tai YS, Bernal AJ, Lavelle DT, Staskawicz BJ, Michelmore R. Functional analyses of the Pto resistance gene family in tomato and the identification of a minor resistance determinant in a susceptible haplotype. Mol Plant Microbe Interact. 2002 Mar; 15(3):281-91. PMID: 11952131.
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