Hooman Rashidi

Title(s)Professor, Pathology and Laboratory Medicine
SchoolUniversity of California, Davis
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    1. Preface: Artificial intelligence (AI), machine learning ML) and digital pathology integration are the next major chapter in our diagnostic pathology and laboratory medicine arena. Semin Diagn Pathol. 2023 Mar; 40(2):69-70. Rashidi HH, Chen M. PMID: 36890028.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    2. Artificial intelligence and machine learning overview in pathology & laboratory medicine: A general review of data preprocessing and basic supervised concepts. Semin Diagn Pathol. 2023 Mar; 40(2):71-87. Albahra S, Gorbett T, Robertson S, D'Aleo G, Kumar SVS, Ockunzzi S, Lallo D, Hu B, Rashidi HH. PMID: 36870825.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    3. Common statistical concepts in the supervised Machine Learning arena. Front Oncol. 2023; 13:1130229. Rashidi HH, Albahra S, Robertson S, Tran NK, Hu B. PMID: 36845729; PMCID: PMC9949554.
      View in: PubMed   Mentions:
    4. Machine learning in the coagulation and hemostasis arena: an overview and evaluation of methods, review of literature, and future directions. J Thromb Haemost. 2023 Apr; 21(4):728-743. Rashidi HH, Bowers KA, Reyes Gil M. PMID: 36696218.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    5. Comparative performance of two automated machine learning platforms for COVID-19 detection by MALDI-TOF-MS. PLoS One. 2022; 17(7):e0263954. Rashidi HH, Pepper J, Howard T, Klein K, May L, Albahra S, Phinney B, Salemi MR, Tran NK. PMID: 35905092; PMCID: PMC9337631.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    6. Identification of Endogenous Peptides in Nasal Swab Transport Media used in MALDI-TOF-MS Based COVID-19 Screening. ACS Omega. 2022 May 24; 7(20):17462-17471. Tsai H, Phinney BS, Grigorean G, Salemi MR, Rashidi HH, Pepper J, Tran NK. PMID: 35600141; PMCID: PMC9113002.
      View in: PubMed   Mentions:
    7. Importance of bone marrow clot sections-Positive for metastatic tumor. Int J Lab Hematol. 2022 08; 44(4):696-697. Dwyre DM, Graff JP, Rashidi HH. PMID: 35170236.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    8. Prediction of Tuberculosis Using an Automated Machine Learning Platform for Models Trained on Synthetic Data. J Pathol Inform. 2022; 13:10. Rashidi HH, Khan IH, Dang LT, Albahra S, Ratan U, Chadderwala N, To W, Srinivas P, Wajda J, Tran NK. PMID: 35136677; PMCID: PMC8794034.
      View in: PubMed   Mentions:
    9. Innovations in infectious disease testing: Leveraging COVID-19 pandemic technologies for the future. Clin Biochem. 2022 Jan 05; 117:10-15. Tran NK, Albahra S, Rashidi H, May L. PMID: 34998789; PMCID: PMC8735816.
      View in: PubMed   Mentions: 2     Fields:    
    10. Analyzing Anatomic Pathology On-Call Summaries to Improve Resident Education. Arch Pathol Lab Med. 2022 01 01; 146(1):112-116. Liu Y, Payne-Uprichard D, Gui D, Darrow MA, Rashidi HH, Matsukuma K. PMID: 33836045.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    11. Evolving Applications of Artificial Intelligence and Machine Learning in Infectious Diseases Testing. Clin Chem. 2021 12 30; 68(1):125-133. Tran NK, Albahra S, May L, Waldman S, Crabtree S, Bainbridge S, Rashidi H. PMID: 34969102; PMCID: PMC9383167.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    12. Automated En Masse Machine Learning Model Generation Shows Comparable Performance as Classic Regression Models for Predicting Delayed Graft Function in Renal Allografts. Transplantation. 2021 12 01; 105(12):2646-2654. Jen KY, Albahra S, Yen F, Sageshima J, Chen LX, Tran N, Rashidi HH. PMID: 33560727.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    13. Automated machine learning for endemic active tuberculosis prediction from multiplex serological data. Sci Rep. 2021 09 09; 11(1):17900. Rashidi HH, Dang LT, Albahra S, Ravindran R, Khan IH. PMID: 34504228; PMCID: PMC8429671.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    14. Immune response dynamics in COVID-19 patients to SARS-CoV-2 and other human coronaviruses. PLoS One. 2021; 16(7):e0254367. Ravindran R, McReynolds C, Yang J, Hammock BD, Ikram A, Ali A, Bashir A, Zohra T, Chang WLW, Hartigan-O'Connor DJ, Rashidi HH, Khan IH. PMID: 34242356; PMCID: PMC8270414.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCellsCTClinical Trials
    15. Machine learning in health care and laboratory medicine: General overview of supervised learning and Auto-ML. Int J Lab Hematol. 2021 Jul; 43 Suppl 1:15-22. Rashidi HH, Tran N, Albahra S, Dang LT. PMID: 34288435.
      View in: PubMed   Mentions: 6     Fields:    
    16. Novel application of automated machine learning with MALDI-TOF-MS for rapid high-throughput screening of COVID-19: a proof of concept. Sci Rep. 2021 04 15; 11(1):8219. Tran NK, Howard T, Walsh R, Pepper J, Loegering J, Phinney B, Salemi MR, Rashidi HH. PMID: 33859233; PMCID: PMC8050054.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    17. Enhancing Military Burn- and Trauma-Related Acute Kidney Injury Prediction Through an Automated Machine Learning Platform and Point-of-Care Testing. Arch Pathol Lab Med. 2021 03 01; 145(3):320-326. Rashidi HH, Makley A, Palmieri TL, Albahra S, Loegering J, Fang L, Yamaguchi K, Gerlach T, Rodriquez D, Tran NK. PMID: 33635951.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    18. Effects of Image Quantity and Image Source Variation on Machine Learning Histology Differential Diagnosis Models. J Pathol Inform. 2021; 12:5. Vali-Betts E, Krause KJ, Dubrovsky A, Olson K, Graff JP, Mitra A, Datta-Mitra A, Beck K, Tsirigos A, Loomis C, Neto AG, Adler E, Rashidi HH. PMID: 34012709; PMCID: PMC8112343.
      View in: PubMed   Mentions: 3  
    19. Effects of image quantity and image source variation on machine learning histology differential diagnosis models. Journal of Pathology Informatics. 2021; 12(1):5. Elham Vali-Betts, Kevin J. Krause, Alanna Dubrovsky, Kristin Olson, John Paul Graff, Anupam Mitra, Ananya Datta-Mitra, Kenneth Beck, Aristotelis Tsirigos, Cynthia Loomis, Antonio Galvao Neto, Esther Adler, Hooman H Rashidi. .
    20. Hematology Outlines Review Flash Cards (iOS App). 2020. Brandon Fennel, John Nguyen and Hooman Rashidi. .
    21. Novel application of an automated-machine learning development tool for predicting burn sepsis: proof of concept. Sci Rep. 2020 07 23; 10(1):12354. Tran NK, Albahra S, Pham TN, Holmes JH, Greenhalgh D, Palmieri TL, Wajda J, Rashidi HH. PMID: 32704168; PMCID: PMC7378181.
      View in: PubMed   Mentions: 15     Fields:    Translation:Humans
    22. Limited Number of Cases May Yield Generalizable Models, a Proof of Concept in Deep Learning for Colon Histology. J Pathol Inform. 2020; 11:5. Holland L, Wei D, Olson KA, Mitra A, Graff JP, Jones AD, Durbin-Johnson B, Mitra AD, Rashidi HH. PMID: 32175170; PMCID: PMC7047745.
      View in: PubMed   Mentions: 3  
    23. Educational Case: Gastric High-Grade B-Cell Lymphoma With MYC and BCL2 Gene Rearrangement (Double-Hit Lymphoma). Acad Pathol. 2020 Jan-Dec; 7:2374289520903415. Betts EV, Rashidi HH, Olson KA. PMID: 32083169; PMCID: PMC7005970.
      View in: PubMed   Mentions:
    24. Early Recognition of Burn- and Trauma-Related Acute Kidney Injury: A Pilot Comparison of Machine Learning Techniques. Sci Rep. 2020 01 14; 10(1):205. Rashidi HH, Sen S, Palmieri TL, Blackmon T, Wajda J, Tran NK. PMID: 31937795; PMCID: PMC6959341.
      View in: PubMed   Mentions: 15     Fields:    Translation:Humans
    25. Artificial Intelligence and Machine Learning in Pathology: The Present Landscape of Supervised Methods. Acad Pathol. 2019 Jan-Dec; 6:2374289519873088. Rashidi HH, Tran NK, Betts EV, Howell LP, Green R. PMID: 31523704; PMCID: PMC6727099.
      View in: PubMed   Mentions: 76  
    26. Artificial intelligence and machine learning for predicting acute kidney injury in severely burned patients: A proof of concept. Burns. 2019 09; 45(6):1350-1358. Tran NK, Sen S, Palmieri TL, Lima K, Falwell S, Wajda J, Rashidi HH. PMID: 31230801.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    27. Impact of pre-analytical variables on deep learning accuracy in histopathology. Histopathology. 2019 Jul; 75(1):39-53. Jones AD, Graff JP, Darrow M, Borowsky A, Olson KA, Gandour-Edwards R, Datta Mitra A, Wei D, Gao G, Durbin-Johnson B, Rashidi HH. PMID: 30801768; PMCID: PMC6591093.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    28. The Job Market Outlook for Residency Graduates: Clear Weather Ahead for the Butterflies? Arch Pathol Lab Med. 2018 Apr; 142(4):435-438. Green R, Hogarth MA, Prystowsky MB, Rashidi HH. PMID: 29425072.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    29. Unusual finding of a megakaryocyte in a peripheral blood smear. Blood. 2017 12 07; 130(23):2573. Ku NK, Rashidi H. PMID: 29217700.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    30. Individual and community factors contributing to anemia among women in rural Baja California, Mexico. PLoS One. 2017; 12(11):e0188590. Moor MA, Fraga MA, Garfein RS, Rashidi HH, Alcaraz J, Kritz-Silverstein D, Elder JP, Brodine SK. PMID: 29176817; PMCID: PMC5703514.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    31. Hematology Outlines: Atlas and Glossary of Hematology (1st Edition). 2017; 224. Hooman H. Rashidi & John Nguyen. .
    32. Heme Quiz1: Hematology Quiz Bank (iOS App). 2017. Hooman H. Rashidi. .
    33. PAX5-Negative Classical Hodgkin Lymphoma: A Case Report of a Rare Entity and Review of the Literature. Case Rep Hematol. 2017; 2017:7531729. Vali Betts E, Dwyre DM, Wang HY, Rashidi HH. PMID: 29109877; PMCID: PMC5646291.
      View in: PubMed   Mentions: 2  
    34. An extremely rare case of concurrent BRAF V600E mutation driven hairy cell leukemia and melanoma: case report and review of literature. Autops Case Rep. 2017 Jul-Sep; 7(3):13-19. Ghorbani-Aghbolaghi A, Lechpammer M, Ali SF, Ku NK, Dwyre DM, Rashidi HH. PMID: 29043205; PMCID: PMC5634429.
      View in: PubMed   Mentions: 4  
    35. Combined Megaloblastic and Sideroblastic Anemia in an Infant Fed With Goat's Milk. J Pediatr Hematol Oncol. 2017 05; 39(4):319-320. Datta-Mitra A, Vali-Betts E, Green R, Rashidi H, Chung JH, Dwyre DM. PMID: 28306690.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    36. Tietz Textbook of Clinical Chemistry and Molecular Diagnostics, 6th Edition. Tietz Textbook of Clinical Chemistry and Molecular Diagnostics, 6th Edition, Chapter 72. Red Blood Cell Morphology and Indices and the Clinical Chemistry Interface. 2017. Hooman Rashidi & Ralph Green. .
    37. CD7 Positive Diffuse Large B-Cell Lymphoma Arising in a Background of Follicular Lymphoma: A Case Report and Review of the Literature. Case Rep Hematol. 2016; 2016:5415974. Vali Betts E, Rashidi HH. PMID: 27774324; PMCID: PMC5059560.
      View in: PubMed   Mentions:
    38. The New Clinicopathologic and Molecular Findings in Myeloid Neoplasms With inv(3)(q21q26)/t(3;3)(q21;q26.2). Arch Pathol Lab Med. 2016 Dec; 140(12):1404-1410. Wang HY, Rashidi HH. PMID: 27628325.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    39. Decreased Anemia Prevalence Among Women and Children in Rural Baja California, Mexico: A 6-Year Comparative Study. J Community Health. 2016 08; 41(4):780-9. Moor MA, Fraga MA, Garfein RS, Harbertson J, Rodriguez-Lainz A, Rashidi HH, Elder JP, Brodine SK. PMID: 26856732.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    40. Translocation (6;15)(q12;q15): A Novel Mutation in a Patient with Therapy-Related Myelodysplastic Syndrome. Case Rep Hematol. 2015; 2015:318545. Ali SF, Sonu RJ, Dwyre DM, Jonas BA, Rashidi HH. PMID: 26798525; PMCID: PMC4698528.
      View in: PubMed   Mentions: 2  
    41. Acute Myeloid Leukemia with Isolated Trisomy 19 Associated with Diffuse Myelofibrosis and Osteosclerosis. Cancers (Basel). 2015 Dec 14; 7(4):2459-65. Stelling A, Jonas BA, Rashidi HH, Abedi M, Chen M. PMID: 26694466; PMCID: PMC4695903.
      View in: PubMed   Mentions:
    42. The Authors' Reply. Am J Clin Pathol. 2015 Jul; 144(1):174. Jialal I, Rashidi HH, Sokoll LJ. PMID: 26263572.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    43. Concurrent copper and iron deficiency in a gastric bypass patient: a great mimicker of MDS. Blood. 2015 Apr 16; 125(16):2582. Sonu RJ, Rashidi HH. PMID: 26060870.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    44. Optimal Molecular Methods in Detecting p190 (BCR-ABL) Fusion Variants in Hematologic Malignancies: A Case Report and Review of the Literature. Case Rep Hematol. 2015; 2015:458052. Sonu RJ, Jonas BA, Dwyre DM, Gregg JP, Rashidi HH. PMID: 25949834; PMCID: PMC4407518.
      View in: PubMed   Mentions: 7  
    45. Clotting activity of polyphosphate-functionalized silica nanoparticles. Angew Chem Int Ed Engl. 2015 Mar 23; 54(13):4018-22. Kudela D, Smith SA, May-Masnou A, Braun GB, Pallaoro A, Nguyen CK, Chuong TT, Nownes S, Allen R, Parker NR, Rashidi HH, Morrissey JH, Stucky GD. PMID: 25651530; PMCID: PMC4782980.
      View in: PubMed   Mentions: 13     Fields:    
    46. Proton density water fraction as a biomarker of bone marrow cellularity: validation in ex vivo spine specimens. Magn Reson Imaging. 2014 Nov; 32(9):1097-101. MacEwan IJ, Glembotski NE, D'Lima D, Bae W, Masuda K, Rashidi HH, Mell LK, Bydder M. PMID: 25240720.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    47. Two cases of mantle cell lymphoma mimicking marginal zone lymphoma. Journal of Hematopathology. 2012 Dec 1; 5(4):335-340. Xu XX, Wang WH, Rashidi RH, Wong WA. .
      View in: Publisher Site   Mentions:
    48. Hematology Outlines Atlas & Glossary iOS App. 2012. Hooman H. Rashidi & John Nguyen. .
    49. Utility of peripheral blood flow cytometry in differentiating low grade versus high grade myelodysplastic syndromes (MDS) and in the evaluation of cytopenias. Int J Clin Exp Pathol. 2012; 5(3):224-30. Rashidi HH, Xu X, Wang HY, Shafi NQ, Rameshkumar K, Messer K, Smith BR, Rose MG. PMID: 22558477; PMCID: PMC3341683.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    50. Rare case of a primary non-dural central nervous system low grade B-cell lymphoma and literature review. Int J Clin Exp Pathol. 2012; 5(1):89-95. Papanicolau-Sengos A, Wang-Rodriguez J, Wang HY, Lee RR, Wong A, Hansen LA, Mahooti S, Rashidi HH. PMID: 22295152; PMCID: PMC3267491.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    51. Risk of lymphoma in patients receiving antitumor necrosis factor therapy: a meta-analysis of published randomized controlled studies. Clin Rheumatol. 2012 Apr; 31(4):631-6. Wong AK, Kerkoutian S, Said J, Rashidi H, Pullarkat ST. PMID: 22147207.
      View in: PubMed   Mentions: 19     Fields:    Translation:Humans
    52. t(4;22)(q12;q11.2) involving presumptive platelet-derived growth factor receptor A and break cluster region in a patient with mixed phenotype acute leukemia. Hum Pathol. 2011 Dec; 42(12):2029-36. Wang HY, Thorson JA, Broome HE, Rashidi HH, Curtin PT, Dell'Aquila ML. PMID: 21676437.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    53. CD20dim-positive T-cell large granular lymphocytic leukemia in a patient with concurrent hairy cell leukemia and plasma cell myeloma. Int J Clin Exp Pathol. 2010 Sep 12; 3(8):798-807. Xu X, Broome EH, Rashidi HH, South ST, Dell'aquila ML, Wang HY. PMID: 21151394; PMCID: PMC2993231.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    54. Systemic mastocytosis in association with chronic lymphocytic leukemia and plasma cell myeloma. Int J Clin Exp Pathol. 2010 Apr 23; 3(4):448-57. Du S, Rashidi HH, Le DT, Kipps TJ, Broome HE, Wang HY. PMID: 20490336; PMCID: PMC2872752.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    55. Hematopoietic Progenitor Cells: Autologous Transplantation. . 2009 Jan 9; 521-541. Rashidi RH, Rowley RS. .
      View in: Publisher Site   Mentions:
    56. Bioinformatics Basics: Applications in Biological Sciences and Medicine (2nd Edition). 2005; 368. Lukas K. Buehler, Hooman H. Rashidi . .
    57. Grundriss der Bioinformatik: Anwendungen in den Biowissenschaften und der Medizin. 2001; 215. Hooman H. Rashidi & Lukas Buehler. .
    58. Bioinformatics Basics: Applications in Biological Sciences and Medicine (1st Edition). 1999; 200. Hooman H. Rashidi & Lukas Buehler. .
    59. Sequence motifs determine structure and Ca++-binding by EF-hand proteins. J Mol Microbiol Biotechnol. 1999 Aug; 1(1):175-82. Rashidi HH, Bauer M, Patterson J, Smith DW. PMID: 10941800.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
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