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Erkin Seker

Title(s)Associate Professor, Electrical and Computer Engineering
SchoolUniversity of California, Davis
Address3177 Kemper Hall
CA 95616
Phone530-752-7300
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    1. Interplay of Effective Surface Area, Mass Transport, and Electrochemical Features in Nanoporous Nucleic Acid Sensors. Anal Chem. 2020 08 04; 92(15):10751-10758. Veselinovic J, AlMashtoub S, Nagella S, Seker E. PMID: 32600033.
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    2. A primary neural cell culture model to study neuron, astrocyte, and microglia interactions in neuroinflammation. J Neuroinflammation. 2020 May 11; 17(1):155. Goshi N, Morgan RK, Lein PJ, Seker E. PMID: 32393376.
      View in: PubMed   Mentions:    Fields:    
    3. Anomalous Trends in Nucleic Acid-Based Electrochemical Biosensors with Nanoporous Gold Electrodes. Anal Chem. 2019 09 17; 91(18):11923-11931. Veselinovic J, Almashtoub S, Seker E. PMID: 31429540.
      View in: PubMed   Mentions: 2     Fields:    
    4. Two-tiered electrical detection, purification, and identification of nucleic acids in complex media. Electrochimica Acta. 2019 Aug 1; 313:116-121. Jovana Veselinovic, Mashari Alangari, Yuanhui Li, Zimple Matharu, Juan M. Artés, Erkin Seker, Joshua Hihath. .
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    5. An electrically-controlled programmable microfluidic concentration waveform generator. J Biol Eng. 2018; 12:31. Garrison J, Li Z, Palanisamy B, Wang L, Seker E. PMID: 30564283.
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    6. Voltage-Gated Closed-Loop Control of Small-Molecule Release from Alumina-Coated Nanoporous Gold Thin Film Electrodes. Advanced Functional Materials. 2018 Jul 1; 28(29):1801292. Zidong Li, Ozge Polat, Erkin Seker. .
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    7. A Microfluidic Platform to Study Astrocyte Adhesion on Nanoporous Gold Thin Films. Nanomaterials (Basel). 2018 Jun 21; 8(7). Hampe AE, Li Z, Sethi S, Lein PJ, Seker E. PMID: 29933551.
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    8. Electrically Guided DNA Immobilization and Multiplexed DNA Detection with Nanoporous Gold Electrodes. Nanomaterials (Basel). 2018 May 21; 8(5). Veselinovic J, Li Z, Daggumati P, Seker E. PMID: 29883441.
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    9. Multifunctional Neural Interfaces for Closed-Loop Control of Neural Activity. Advanced Functional Materials. 2018 Mar 1; 28(12):1703523. Christopher A. R. Chapman, Noah Goshi, Erkin Seker. .
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    10. Nanoporous metals by alloy corrosion: Bioanalytical and biomedical applications. MRS Bull. 2018 Jan; 43(1):49-56. Seker E, Shih WC, Stine KJ. PMID: 32684663.
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    11. Engineering the interface between lipid membranes and nanoporous gold: A study by quartz crystal microbalance with dissipation monitoring. Biointerphases. 2018 01 05; 13(1):011002. Losada-Pérez P, Polat O, Parikh AN, Seker E, Renner FU. PMID: 29304551.
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    12. Nanoporous metals by alloy corrosion: Bioanalytical and biomedical applications. MRS Bulletin. 2018 Jan 1; 43(1):49-56. Erkin Seker, Wei-Chuan Shih, Keith J. Stine. .
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    13. Configurable microfluidic platform for investigating therapeutic delivery from biomedical device coatings. Lab Chip. 2017 09 26; 17(19):3331-3337. Li Z, Seker E. PMID: 28868535.
      View in: PubMed   Mentions: 1     Fields:    
    14. Nanostructure Introduces Artifacts in Quantitative Immunofluorescence by Influencing Fluorophore Intensity. Sci Rep. 2017 03 27; 7(1):427. Chapman CA, Zhu X, Chen H, Yanik AA, Lein PJ, Seker E. PMID: 28348397.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    15. Nanoporous-Gold-Based Electrode Morphology Libraries for Investigating Structure-Property Relationships in Nucleic Acid Based Electrochemical Biosensors. ACS Appl Mater Interfaces. 2017 Apr 19; 9(15):12959-12966. Matharu Z, Daggumati P, Wang L, Dorofeeva TS, Li Z, Seker E. PMID: 28094510.
      View in: PubMed   Mentions: 5     Fields:    
    16. Nanoporous Gold Biointerfaces: Modifying Nanostructure to Control Neural Cell Coverage and Enhance Electrophysiological Recording Performance. Adv Funct Mater. 2017 Jan 19; 27(3). Chapman CAR, Wang L, Chen H, Garrison J, Lein PJ, Seker E. PMID: 28626362.
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    17. In situ electrical modulation and monitoring of nanoporous gold morphology. Nanoscale. 2016 Dec 01; 8(47):19551-19556. Dorofeeva TS, Seker E. PMID: 27790649.
      View in: PubMed   Mentions: 3     Fields:    
    18. Effect of Surface–Molecule Interactions on Molecular Loading Capacity of Nanoporous Gold Thin Films. The Journal of Physical Chemistry C. 2016 Sep 1; 120(34):19189-19194. Ozge Polat, Erkin Seker. .
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    19. Sequence-Specific Electrical Purification of Nucleic Acids with Nanoporous Gold Electrodes. J Am Chem Soc. 2016 06 22; 138(24):7711-7. Daggumati P, Appelt S, Matharu Z, Marco ML, Seker E. PMID: 27244455.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    20. Mechanisms of Reduced Astrocyte Surface Coverage in Cortical Neuron-Glia Co-cultures on Nanoporous Gold Surfaces. Cell Mol Bioeng. 2016 Sep; 9(3):433-442. Chapman CA, Chen H, Stamou M, Lein PJ, Seker E. PMID: 27795742.
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    21. Development of a Microsphere-Based System to Facilitate Real-Time Insulin Monitoring. J Diabetes Sci Technol. 2016 05; 10(3):689-96. Kahanovitz L, Seker E, Marks RS, Yarmush ML, Konry T, Russell SJ. PMID: 26721524.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    22. Utilizing dynamic laser speckle to probe nanoscale morphology evolution in nanoporous gold thin films. Opt Express. 2016 Mar 07; 24(5):5323-5333. Chapman CAR, Ly S, Wang L, Seker E, Matthews MJ. PMID: 29092356.
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    23. Electrochemically Triggered Pore Expansion in Nanoporous Gold Thin Films. The Journal of Physical Chemistry C. 2016 Feb 25; 120(7):4080-4086. Tatiana S. Dorofeeva, Zimple Matharu, Pallavi Daggumati, Erkin Seker. .
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    24. Engineering on-chip nanoporous gold material libraries via precision photothermal treatment. Nanoscale. 2016 Jan 14; 8(2):785-95. Chapman CA, Wang L, Biener J, Seker E, Biener MM, Matthews MJ. PMID: 26411758.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    25. Substrate Topography Guides Pore Morphology Evolution in Nanoporous Gold Thin Films. Scr Mater. 2016 Jan 01; 110:33-36. Chapman CA, Daggumati P, Gott SC, Rao MP, Seker E. PMID: 26435685.
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    26. Halide-Gated Molecular Release from Nanoporous Gold Thin Films. The Journal of Physical Chemistry C. 2015 Nov 5; 119(44):24812-24818. Ozge Polat, Erkin Seker. .
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    27. Immobilization-mediated reduction in melting temperatures of DNA–DNA and DNA–RNA hybrids: Immobilized DNA probe hybridization studied by SPR. Colloids and Surfaces A Physicochemical and Engineering Aspects. 2015 Sep 1; 481(Clin. Chem. 44 1998):72-79. Jing C. Zhou, Bob Feller, Bill Hinsberg, Geeta Sethi, Paul Feldstein, Joshua Hihath, Erkin Seker, Maria Marco, Andre Knoesen, Robert Miller. .
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    28. Biofouling-resilient nanoporous gold electrodes for DNA sensing. Anal Chem. 2015 Sep 01; 87(17):8618-22. Daggumati P, Matharu Z, Wang L, Seker E. PMID: 26274576.
      View in: PubMed   Mentions: 7     Fields:    Translation:AnimalsPHPublic Health
    29. Electrically tunable pore morphology in nanoporous gold thin films. Nano Research. 2015 Jul 1; 8(7):2188-2198. Tatiana S. Dorofeeva, Erkin Seker. .
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    30. Effect of nanoporous gold thin film morphology on electrochemical DNA sensing. Anal Chem. 2015 Aug 18; 87(16):8149-56. Daggumati P, Matharu Z, Seker E. PMID: 25892217.
      View in: PubMed   Mentions: 11     Fields:    
    31. Nanoporous gold as a neural interface coating: effects of topography, surface chemistry, and feature size. ACS Appl Mater Interfaces. 2015 Apr 08; 7(13):7093-100. Chapman CA, Chen H, Stamou M, Biener J, Biener MM, Lein PJ, Seker E. PMID: 25706691.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    32. Resolving cancer-stroma interfacial signalling and interventions with micropatterned tumour-stromal assays. Nat Commun. 2014 Dec 09; 5:5662. Shen K, Luk S, Hicks DF, Elman JS, Bohr S, Iwamoto Y, Murray R, Pena K, Wang F, Seker E, Weissleder R, Yarmush ML, Toner M, Sgroi D, Parekkadan B. PMID: 25489927.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimalsCells
    33. Molecular release from patterned nanoporous gold thin films. Nanoscale. 2014 Jun 21; 6(12):7062-71. Kurtulus O, Daggumati P, Seker E. PMID: 24842586.
      View in: PubMed   Mentions: 12     Fields:    Translation:Cells
    34. A long academic journey. Sci Transl Med. 2014 May 07; 6(235):235cm4. Onaral B, Seker E. PMID: 24807555.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    35. Fabrication and characterization of flexible and tunable plasmonic nanostructures. Sci Rep. 2013 Dec 02; 3:3396. Kahraman M, Daggumati P, Kurtulus O, Seker E, Wachsmann-Hogiu S. PMID: 24292236.
      View in: PubMed   Mentions: 9     Fields:    
    36. Bacterial Vibrations. Science Translational Medicine. 2013 Jul 31; 5(196):196ec126-196ec126. Erkin Seker. .
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    37. Microfabrication of nanoporous gold patterns for cell-material interaction studies. J Vis Exp. 2013 Jul 15; (77):e50678. Daggumati P, Kurtulus O, Chapman CA, Dimlioglu D, Seker E. PMID: 23893025.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    38. Microfluidics: On-Chip Platforms as In Vitro Disease Models. . 2013 Feb 1; 213-239. Shan Gao, Erkin Seker, Martin L. Yarmush. .
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    39. Tuning Drug Release Profile from Nanoporous Gold Thin Films. MRS Advances. 2013 Jan 1; 1569:259-263. Ozge Kurtulus, Erkin Seker. .
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    40. Ex vivo gene delivery to hepatocytes: techniques, challenges, and underlying mechanisms. Ann Biomed Eng. 2012 Sep; 40(9):1851-61. Gao S, Seker E, Casali M, Wang F, Bale SS, Price GM, Yarmush ML. PMID: 22484829.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    41. Microfabrication-compatible nanoporous gold foams as biomaterials for drug delivery. Adv Healthc Mater. 2012 Mar; 1(2):172-6. Seker E, Berdichevsky Y, Staley KJ, Yarmush ML. PMID: 23184720.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    42. Particles and microfluidics merged: perspectives of highly sensitive diagnostic detection. Mikrochim Acta. 2012 Feb; 176(3-4):251-269. Konry T, Bale SS, Bhushan A, Shen K, Seker E, Polyak B, Yarmush M. PMID: 25378716.
      View in: PubMed   Mentions: 3     Fields:    
    43. Nanotopography effects on astrocyte attachment to nanoporous gold surfaces. Conf Proc IEEE Eng Med Biol Soc. 2012; 2012:6568-71. Kurtulus O, Seker E. PMID: 23367434.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    44. Nanoporous Gold: A Biomaterial for Microfabricated Drug-Delivery Platforms. MRS Advances. 2012 Jan 1; 1415:mrsf11-1415-ii07-04. Erkin Seker, Yevgeny Berdichevsky, Kevin J. Staley, Martin L. Yarmush. .
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    45. Platinum nanoparticle-facilitated reflective surfaces for non-contact temperature control in microfluidic devices for PCR amplification. Lab Chip. 2012 Jan 07; 12(1):127-32. Leslie DC, Seker E, Bazydlo LA, Strachan BC, Landers JP. PMID: 22072395.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    46. Solving medical problems with BioMEMS. IEEE Pulse. 2011 Nov; 2(6):51-9. Seker E, Sung JH, Shuler ML, Yarmush ML. PMID: 22147069.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    47. Molecular interactions in surface-assembled monolayers of short double-stranded DNA. Langmuir. 2010 Jul 06; 26(13):11574-80. Huang L, Seker E, Landers JP, Begley MR, Utz M. PMID: 20550165.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    48. PDMS-Glass Interface Adhesion Energy Determined Via Comprehensive Solutions for Thin Film Bulge/Blister Tests. Journal of Applied Mechanics. 2010 May 1; 77(3):031007. Aarash Sofla, Erkin Seker, James P. Landers, Matthew R. Begley. .
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    49. The fabrication of low-impedance nanoporous gold multiple-electrode arrays for neural electrophysiology studies. Nanotechnology. 2010 Mar 26; 21(12):125504. Seker E, Berdichevsky Y, Begley MR, Reed ML, Staley KJ, Yarmush ML. PMID: 20203356.
      View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
    50. Nanoporous Gold: Fabrication, Characterization, and Applications. Materials. 2009 Dec 3; 2(4):2188-2215. Erkin Seker, Michael L. Reed, Matthew R. Begley. .
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    51. High-throughput screening of nanoparticle catalysts made by flame spray pyrolysis as hydrocarbon/NO oxidation catalysts. J Am Chem Soc. 2009 Jul 08; 131(26):9207-19. Weidenhof B, Reiser M, Stöwe K, Maier WF, Kim M, Azurdia J, Gulari E, Seker E, Barks A, Laine RM. PMID: 19566095.
      View in: PubMed   Mentions: 2     Fields:    
    52. Nonlinear pressure-flow relationships for passive microfluidic valves. Lab Chip. 2009 Sep 21; 9(18):2691-7. Seker E, Leslie DC, Haj-Hariri H, Landers JP, Utz M, Begley MR. PMID: 19704985.
      View in: PubMed   Mentions: 5     Fields:    
    53. A thermal treatment approach to reduce microscale void formation in blanket nanoporous gold films. Scripta Materialia. 2009 Mar 1; 60(6):435-438. Erkin Seker, Michael L. Reed, Matthew R. Begley. .
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    54. Frequency-specific flow control in microfluidic circuits with passive elastomeric features. Nature Physics. 2009 Mar 1; 5(3):231-235. Daniel C. Leslie, Christopher J. Easley, Erkin Seker, James M. Karlinsey, Marcel Utz, Matthew R. Begley, James P. Landers. .
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    55. Flexible and conductive bilayer membranes of nanoporous gold and silicone: Synthesis and characterization. Applied Physics Letters. 2008 Apr 14; 92(15):154101. Erkin Seker, Michael Reed, Marcel Utz, Matthew R. Begley. .
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    56. Relationships Between Morphology and Stress-State of Gold-Silver Alloys and Nanoporous Gold Blanket Films. ECS Transactions. 2008 Jan 1; 11(24):43-48. Erkin Seker, John Gaskins, Matthew R. Begley, Hilary Bart-Smith, G. Zangari, Robert G. Kelly, Michael L. Reed. .
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    57. Kinetics of capillary wetting in nanoporous films in the presence of surface evaporation. Applied Physics Letters. 2008 Jan 1; 92(1):013128. Erkin Seker, Matthew R. Begley, Michael L. Reed, Marcel Utz. .
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    58. The effects of post-fabrication annealing on the mechanical properties of freestanding nanoporous gold structures. Acta Materialia. 2007 Aug 1; 55(14):4593-4602. Erkin Seker, John T. Gaskins, Hilary Bart-Smith, Jianzhong Zhu, Michael L. Reed, Giovanni Zangari, Robert Kelly, Matthew R. Begley. .
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    59. Wetting Phenomenon in Nanoporous Gold Films. ECS Transactions. 2007 Jan 1; 6(11):83-89. Erkin Seker, Tania Tauer, Jianzhong Zhu, Matthew Begley, Hilary Bart-Smith, Giovanni Zangari, Robert G. Kelly, Marcel Utz, Michael L. Reed. .
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    60. Investigating Porosity and Stress Evolution in Nanoporous Gold Films by Timed Thermal Treatment. ECS Transactions. 2007 Jan 1; 6(11):91-97. Erkin Seker, Matthew Begley, Hilary Bart-Smith, Giovanni Zangari, Robert G. Kelly, Michael L. Reed. .
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    61. Mitigation of tensile failure in released nanoporous metal microstructures via thermal treatment. Applied Physics Letters. 2006 Sep 25; 89(13):133104. Jianzhong Zhu, Erkin Seker, Hilary Bart-Smith, Matthew R. Begley, Robert G. Kelly, Giovanni Zangari, Whye-Kei Lye, Michael L. Reed. .
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