Dennis J Montoya

Title(s)Assistant Researcher, Biochemistry and Molecular Medicine
SchoolSchool of Medicine
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    University of California, Berkeley, Berkeley, CABA05/2001Molecular and Cellular Biology, Immunology
    University of California, Los Angeles, Los Angeles. CAPh.D.08/2009Microbiology, Immunology, and Molecular Genetics

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Targeting RAS-ERK pathway alterations with MEK inhibitors to improve chemosensitivity in high grade serous ovarian cancers. Gynecol Oncol. 2023 Nov; 178:69-79. Nguyen NT, Raetz A, Montoya D, Schilling V, Tong C, Brooks RA, Leiserowitz G, Chien J. PMID: 37806229.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    2. Distinct transcriptional profiles of maternal and fetal placental macrophages at term are associated with gravidity. bioRxiv. 2023 Sep 28. Ozarslan N, Robinson JF, Buarpung S, Kim MY, Ansbro MR, Akram J, Montoya DJ, Kamya MR, Kakuru A, Dorsey G, Rosenthal PJ, Cheng G, Feeney ME, Fisher SJ, Gaw SL. PMID: 37808856; PMCID: PMC10557660.
      View in: PubMed   Mentions:
    3. Dynamic evaluation of blood immune cells predictive of response to immune checkpoint inhibitors in NSCLC by multicolor spectrum flow cytometry. Front Immunol. 2023; 14:1206631. Ma W, Wei S, Long S, Tian EC, McLaughlin B, Jaimes M, Montoya DJ, Viswanath VR, Chien J, Zhang Q, Van Dyke JE, Chen S, Li T. PMID: 37638022; PMCID: PMC10449448.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    4. Labyrinthin Expression Is Associated with Poor Prognosis in Patients with Non-Small-Cell Lung Cancer. Cancers (Basel). 2023 Feb 01; 15(3). Ma W, Zeng J, Montoya DJ, Toomey K, Zhou C, Chen S, Liu D, Babich M, Radosevich JA, Li T. PMID: 36765881; PMCID: PMC9913764.
      View in: PubMed   Mentions: 1  
    5. Longitudinal profiling in patients undergoing cardiac surgery reveals postoperative changes in DNA methylation. Clin Epigenetics. 2022 12 30; 14(1):195. Fischer MA, Chapski DJ, Soehalim E, Montoya DJ, Grogan T, Pellegrini M, Cai H, Shemin RJ, Vondriska TM. PMID: 36585726; PMCID: PMC9805211.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    6. DNA Methylation-Based Prediction of Post-operative Atrial Fibrillation. Front Cardiovasc Med. 2022; 9:837725. Fischer MA, Mahajan A, Cabaj M, Kimball TH, Morselli M, Soehalim E, Chapski DJ, Montoya D, Farrell CP, Scovotti J, Bueno CT, Mimila NA, Shemin RJ, Elashoff D, Pellegrini M, Monte E, Vondriska TM. PMID: 35620521; PMCID: PMC9127230.
      View in: PubMed   Mentions: 5  
    7. DNA methylation profiles in pneumonia patients reflect changes in cell types and pneumonia severity. Epigenetics. 2022 12; 17(12):1646-1660. Morselli M, Farrell C, Montoya D, Gören T, Sabirli R, Türkçüer I, Kurt Ö, Köseler A, Pellegrini M. PMID: 35311624; PMCID: PMC9621067.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    8. Systematic evaluation of transcriptomics-based deconvolution methods and references using thousands of clinical samples. Brief Bioinform. 2021 11 05; 22(6). Nadel BB, Oliva M, Shou BL, Mitchell K, Ma F, Montoya DJ, Mouton A, Kim-Hellmuth S, Stranger BE, Pellegrini M, Mangul S. PMID: 34346485; PMCID: PMC8768458.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    9. Quinacrine Induces Nucleolar Stress in Treatment-Refractory Ovarian Cancer Cell Lines. Cancers (Basel). 2021 Sep 16; 13(18). Oien DB, Ray U, Pathoulas CL, Jin L, Thirusangu P, Jung D, Kumka JE, Xiao Y, Sarkar Bhattacharya S, Montoya D, Chien J, Shridhar V. PMID: 34572872; PMCID: PMC8466834.
      View in: PubMed   Mentions: 4  
    10. Effect of the p53 P72R Polymorphism on Mutant TP53 Allele Selection in Human Cancer. J Natl Cancer Inst. 2021 09 04; 113(9):1246-1257. De Souza C, Madden J, Koestler DC, Minn D, Montoya DJ, Minn K, Raetz AG, Zhu Z, Xiao WW, Tahmassebi N, Reddy H, Nelson N, Karnezis AN, Chien J. PMID: 33555293; PMCID: PMC8633460.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    11. Human DNA methylation signatures differentiate persistent from resolving MRSA bacteremia. Proc Natl Acad Sci U S A. 2021 03 09; 118(10). Chang YL, Rossetti M, Gjertson DW, Rubbi L, Thompson M, Montoya DJ, Morselli M, Ruffin F, Hoffmann A, Pellegrini M, Fowler VG, Yeaman MR, Reed EF, with the MRSA Systems Immunology Group. PMID: 33649198; PMCID: PMC7958259.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    12. The Gene Expression Deconvolution Interactive Tool (GEDIT): accurate cell type quantification from gene expression data. Gigascience. 2021 02 16; 10(2). Nadel BB, Lopez D, Montoya DJ, Ma F, Waddel H, Khan MM, Mangul S, Pellegrini M. PMID: 33590863; PMCID: PMC7931818.
      View in: PubMed   Mentions: 19     Fields:    Translation:Animals
    13. The P72R Polymorphism in R248Q/W p53 Mutants Modifies the Mutant Effect on Epithelial to Mesenchymal Transition Phenotype and Cell Invasion via CXCL1 Expression. Int J Mol Sci. 2020 Oct 28; 21(21). De Souza C, Madden JA, Minn D, Kumar VE, Montoya DJ, Nambiar R, Zhu Z, Xiao WW, Tahmassebi N, Kathi H, Nelson N, Karnezis AN, Chien J. PMID: 33126568; PMCID: PMC7662892.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    14. Integrative Analysis of Glucometabolic Traits, Adipose Tissue DNA Methylation, and Gene Expression Identifies Epigenetic Regulatory Mechanisms of Insulin Resistance and Obesity in African Americans. Diabetes. 2020 12; 69(12):2779-2793. Sharma NK, Comeau ME, Montoya D, Pellegrini M, Howard TD, Langefeld CD, Das SK. PMID: 32928872; PMCID: PMC7679782.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    15. Author Correction: Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing. Nat Commun. 2020 09 04; 11(1):4499. Mandric I, Rotman J, Yang HT, Strauli N, Montoya DJ, Van Der Wey W, Ronas JR, Statz B, Yao D, Petrova V, Zelikovsky A, Spreafico R, Shifman S, Zaitlen N, Rossetti M, Ansel KM, Eskin E, Mangul S. PMID: 32887888; PMCID: PMC7474053.
      View in: PubMed   Mentions: 1     Fields:    
    16. Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing. Nat Commun. 2020 06 19; 11(1):3126. Mandric I, Rotman J, Yang HT, Strauli N, Montoya DJ, Van Der Wey W, Ronas JR, Statz B, Yao D, Petrova V, Zelikovsky A, Spreafico R, Shifman S, Zaitlen N, Rossetti M, Ansel KM, Eskin E, Mangul S. PMID: 32561710; PMCID: PMC7305308.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansCells
    17. The cell fate regulator NUPR1 is induced by Mycobacterium leprae via type I interferon in human leprosy. PLoS Negl Trop Dis. 2019 07; 13(7):e0007589. R Andrade P, Mehta M, Lu J, M B Teles R, Montoya D, O Scumpia P, Nunes Sarno E, Ochoa MT, Ma F, Pellegrini M, Modlin RL. PMID: 31344041; PMCID: PMC6684084.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    18. Vitamin A Metabolism by Dendritic Cells Triggers an Antimicrobial Response against Mycobacterium tuberculosis. mSphere. 2019 06 05; 4(3). Kim EW, De Leon A, Jiang Z, Radu RA, Martineau AR, Chan ED, Bai X, Su WL, Montoya DJ, Modlin RL, Liu PT. PMID: 31167948; PMCID: PMC6553556.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    19. Dual RNA-Seq of Human Leprosy Lesions Identifies Bacterial Determinants Linked to Host Immune Response. Cell Rep. 2019 03 26; 26(13):3574-3585.e3. Montoya DJ, Andrade P, Silva BJA, Teles RMB, Ma F, Bryson B, Sadanand S, Noel T, Lu J, Sarno E, Arnvig KB, Young D, Lahiri R, Williams DL, Fortune S, Bloom BR, Pellegrini M, Modlin RL. PMID: 30917313; PMCID: PMC6508871.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCells
    20. Plasticity of antimicrobial and phagocytic programs in human macrophages. Immunology. 2019 02; 156(2):164-173. Montoya D, Mehta M, Ferguson BG, Teles RMB, Krutzik SR, Cruz D, Pellegrini M, Modlin RL. PMID: 30357820; PMCID: PMC6328994.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    21. A phylogenomic study quantifies competing mechanisms for pseudogenization in prokaryotes-The Mycobacterium leprae case. PLoS One. 2018; 13(11):e0204322. Avni E, Montoya D, Lopez D, Modlin R, Pellegrini M, Snir S. PMID: 30383852; PMCID: PMC6211624.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    22. Epigenome-wide association in adipose tissue from the METSIM cohort. Hum Mol Genet. 2018 07 15; 27(14):2586. Orozco LD, Farrell C, Hale C, Rubbi L, Rinaldi A, Civelek M, Pan C, Lam L, Montoya D, Edillor C, Seldin M, Boehnke M, Mohlke KL, Jacobsen S, Kuusisto J, Laakso M, Lusis AJ, Pellegrini M. PMID: 29893869; PMCID: PMC6030960.
      View in: PubMed   Mentions: 9     Fields:    
    23. Epigenome-wide association in adipose tissue from the METSIM cohort. Hum Mol Genet. 2018 05 15; 27(10):1830-1846. Orozco LD, Farrell C, Hale C, Rubbi L, Rinaldi A, Civelek M, Pan C, Lam L, Montoya D, Edillor C, Seldin M, Boehnke M, Mohlke KL, Jacobsen S, Kuusisto J, Laakso M, Lusis AJ, Pellegrini M. PMID: 29566149; PMCID: PMC5932563.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    24. Genetic Mechanisms of Immune Evasion in Colorectal Cancer. Cancer Discov. 2018 06; 8(6):730-749. Grasso CS, Giannakis M, Wells DK, Hamada T, Mu XJ, Quist M, Nowak JA, Nishihara R, Qian ZR, Inamura K, Morikawa T, Nosho K, Abril-Rodriguez G, Connolly C, Escuin-Ordinas H, Geybels MS, Grady WM, Hsu L, Hu-Lieskovan S, Huyghe JR, Kim YJ, Krystofinski P, Leiserson MDM, Montoya DJ, Nadel BB, Pellegrini M, Pritchard CC, Puig-Saus C, Quist EH, Raphael BJ, Salipante SJ, Shin DS, Shinbrot E, Shirts B, Shukla S, Stanford JL, Sun W, Tsoi J, Upfill-Brown A, Wheeler DA, Wu CJ, Yu M, Zaidi SH, Zaretsky JM, Gabriel SB, Lander ES, Garraway LA, Hudson TJ, Fuchs CS, Ribas A, Ogino S, Peters U. PMID: 29510987; PMCID: PMC5984687.
      View in: PubMed   Mentions: 236     Fields:    Translation:HumansCells
    25. SaVanT: a web-based tool for the sample-level visualization of molecular signatures in gene expression profiles. BMC Genomics. 2017 Oct 25; 18(1):824. Lopez D, Montoya D, Ambrose M, Lam L, Briscoe L, Adams C, Modlin RL, Pellegrini M. PMID: 29070035; PMCID: PMC5657101.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansAnimalsCells
    26. Prenatal Growth Patterns and Birthweight Are Associated With Differential DNA Methylation and Gene Expression of Cardiometabolic Risk Genes in Human Placentas: A Discovery-Based Approach. Reprod Sci. 2018 04; 25(4):523-539. Chen PY, Chu A, Liao WW, Rubbi L, Janzen C, Hsu FM, Thamotharan S, Ganguly A, Lam L, Montoya D, Pellegrini M, Devaskar SU. PMID: 28693373; PMCID: PMC6348426.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    27. Jagged1 Instructs Macrophage Differentiation in Leprosy. PLoS Pathog. 2016 08; 12(8):e1005808. Kibbie J, Teles RM, Wang Z, Hong P, Montoya D, Krutzik S, Lee S, Kwon O, Modlin RL, Cruz D. PMID: 27532668; PMCID: PMC4988718.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
    28. Epigenetic changes in T-cell and monocyte signatures and production of neurotoxic cytokines in ALS patients. FASEB J. 2016 10; 30(10):3461-3473. Lam L, Chin L, Halder RC, Sagong B, Famenini S, Sayre J, Montoya D, Rubbi L, Pellegrini M, Fiala M. PMID: 27368295; PMCID: PMC5024692.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansAnimalsCells
    29. Anti-inflammatory therapies of amyotrophic lateral sclerosis guided by immune pathways. Am J Neurodegener Dis. 2015; 4(2):28-39. Lam L, Halder RC, Montoya DJ, Rubbi L, Rinaldi A, Sagong B, Weitzman S, Rubattino R, Singh RR, Pellegrini M, Fiala M. PMID: 26807342; PMCID: PMC4700124.
      View in: PubMed   Mentions: 8  
    30. IL-32 is a molecular marker of a host defense network in human tuberculosis. Sci Transl Med. 2014 Aug 20; 6(250):250ra114. Montoya D, Inkeles MS, Liu PT, Realegeno S, Teles RM, Vaidya P, Munoz MA, Schenk M, Swindell WR, Chun R, Zavala K, Hewison M, Adams JS, Horvath S, Pellegrini M, Bloom BR, Modlin RL. PMID: 25143364; PMCID: PMC4175914.
      View in: PubMed   Mentions: 56     Fields:    Translation:HumansCells
    31. Interleukin-1β triggers the differentiation of macrophages with enhanced capacity to present mycobacterial antigen to T cells. Immunology. 2014 Feb; 141(2):174-80. Schenk M, Fabri M, Krutzik SR, Lee DJ, Vu DM, Sieling PA, Montoya D, Liu PT, Modlin RL. PMID: 24032597; PMCID: PMC3904238.
      View in: PubMed   Mentions: 38     Fields:    Translation:HumansCells
    32. Type I interferon suppresses type II interferon-triggered human anti-mycobacterial responses. Science. 2013 Mar 22; 339(6126):1448-53. Teles RM, Graeber TG, Krutzik SR, Montoya D, Schenk M, Lee DJ, Komisopoulou E, Kelly-Scumpia K, Chun R, Iyer SS, Sarno EN, Rea TH, Hewison M, Adams JS, Popper SJ, Relman DA, Stenger S, Bloom BR, Cheng G, Modlin RL. PMID: 23449998; PMCID: PMC3653587.
      View in: PubMed   Mentions: 211     Fields:    Translation:HumansCells
    33. Vitamin D is required for IFN-gamma-mediated antimicrobial activity of human macrophages. Sci Transl Med. 2011 Oct 12; 3(104):104ra102. Fabri M, Stenger S, Shin DM, Yuk JM, Liu PT, Realegeno S, Lee HM, Krutzik SR, Schenk M, Sieling PA, Teles R, Montoya D, Iyer SS, Bruns H, Lewinsohn DM, Hollis BW, Hewison M, Adams JS, Steinmeyer A, Zügel U, Cheng G, Jo EK, Bloom BR, Modlin RL. PMID: 21998409; PMCID: PMC3269210.
      View in: PubMed   Mentions: 259     Fields:    Translation:HumansCells
    34. Learning from leprosy: insight into the human innate immune response. Adv Immunol. 2010; 105:1-24. Montoya D, Modlin RL. PMID: 20510728.
      View in: PubMed   Mentions: 27     Fields:    Translation:HumansCells
    35. Divergence of macrophage phagocytic and antimicrobial programs in leprosy. Cell Host Microbe. 2009 Oct 22; 6(4):343-53. Montoya D, Cruz D, Teles RM, Lee DJ, Ochoa MT, Krutzik SR, Chun R, Schenk M, Zhang X, Ferguson BG, Burdick AE, Sarno EN, Rea TH, Hewison M, Adams JS, Cheng G, Modlin RL. PMID: 19837374; PMCID: PMC2764558.
      View in: PubMed   Mentions: 91     Fields:    Translation:HumansCells
    36. Host-derived oxidized phospholipids and HDL regulate innate immunity in human leprosy. J Clin Invest. 2008 Aug; 118(8):2917-28. Cruz D, Watson AD, Miller CS, Montoya D, Ochoa MT, Sieling PA, Gutierrez MA, Navab M, Reddy ST, Witztum JL, Fogelman AM, Rea TH, Eisenberg D, Berliner J, Modlin RL. PMID: 18636118; PMCID: PMC2467381.
      View in: PubMed   Mentions: 83     Fields:    Translation:HumansCells
    37. Identification of prostaglandin E2 receptor subtype 2 as a receptor activated by OxPAPC. Circ Res. 2006 Mar 17; 98(5):642-50. Li R, Mouillesseaux KP, Montoya D, Cruz D, Gharavi N, Dun M, Koroniak L, Berliner JA. PMID: 16456101.
      View in: PubMed   Mentions: 47     Fields:    Translation:HumansCells
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