Hong Ji

Title(s)Associate Professor, VM: Anatomy Physiology & Cell Biology
SchoolSchool of Veterinary Medicine
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    Interplay between TET1-mediated epigenomic mechanisms and m6A RNA modification in pulmonary inflammation induced by particulate matter
    NIH R01ES038328Apr 1, 2026 - Mar 31, 2031
    Role: Principal Investigator
    Molecular mechanisms underlying persistent effects of early life exposure on lung function and remodeling
    NIH R21AI193999Jul 23, 2025 - Jun 30, 2027
    Role: Principal Investigator
    Role of TET1 in airway epithelium and childhood asthma
    NIH R01AI141569May 20, 2019 - Apr 30, 2025
    Role: Principal Investigator
    The role of TET1 in childhood asthma
    NIH R21AI119236May 1, 2015 - Apr 30, 2018
    Role: Principal Investigator
    DNA methylation in children hospitalized with asthma exacerbation
    NIH R21AI101375Aug 1, 2012 - Jul 31, 2015
    Role: Principal Investigator

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Persistent transcriptomic changes following repeated exposure to wood smoke in non-human primate airway epithelial cells. bioRxiv. 2025 Nov 16. Holmes E, Brown AP, Elston SP, Royer CM, Ji H. PMID: 41292770; PMCID: PMC12642581.
      View in: PubMed   Mentions:
    2. Bile acids engage the SIPR-STAT3 signaling axis to modulate regulatory T cell responses in fibrosing cholangiopathies. J Hepatol. 2025 Nov; 83(5):1128-1141. Kudira R, Yang ZF, Osuji I, Damen MSMA, Yang Vom Hofe A, Singh M, Karns R, Bariya P, Pfuhler L, Mullen M, Taylor A, Ji H, Lages CS, Shi T, Pasula S, Wayman JA, Bernieh A, Zhang W, Chougnet CA, Hildeman DA, Tiao GM, Huppert SS, Subramanian S, Salomonis N, Miraldi ER, Miethke AG. PMID: 40545044; PMCID: PMC12888825.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
    3. Low TET1 Expression Levels in COPD Are Associated with Airway and Blood Neutrophilia. medRxiv. 2025 May 05. Ji H, Zhang X, Linderholm AL, Juarez M, Schivo M, Kuhn B, Harper RW, Zeki AA, Haczku A. PMID: 40330597; PMCID: PMC12051492.
      View in: PubMed   Mentions:
    4. Silencing TET1 expression alters the epigenomic landscape and amplifies transcriptomic responses to allergen in airway epithelial cells. Environ Epigenet. 2025; 11(1):dvaf007. Brown AP, Parameswaran S, Cai L, Elston S, Pham C, Barski A, Weirauch MT, Ji H. PMID: 40401166; PMCID: PMC12094077.
      View in: PubMed   Mentions: 1  
    5. "Air That Once Was Breath" Part 2: Wildfire Smoke and Airway Disease - "Climate Change, Allergy and Immunology" Special IAAI Article Collection: Collegium Internationale Allergologicum Update 2023. Int Arch Allergy Immunol. 2024; 185(6):617-630. Bowman WS, Schmidt RJ, Sanghar GK, Thompson Iii GR, Ji H, Zeki AA, Haczku A. PMID: 38527432; PMCID: PMC11548886.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansPHPublic Health
    6. Association between maternal prenatal depressive symptoms and offspring epigenetic aging at 3-5 weeks. Ann Epidemiol. 2024 05; 93:1-6. Folger AT, Ding L, Yolton K, Ammerman RT, Ji H, Frey JR, Bowers KA. PMID: 38479709; PMCID: PMC11031304.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    7. "Air That Once Was Breath" Part 1: Wildfire-Smoke-Induced Mechanisms of Airway Inflammation - "Climate Change, Allergy and Immunology" Special IAAI Article Collection: Collegium Internationale Allergologicum Update 2023. Int Arch Allergy Immunol. 2024; 185(6):600-616. Bowman WS, Schmidt RJ, Sanghar GK, Thompson Iii GR, Ji H, Zeki AA, Haczku A. PMID: 38452750; PMCID: PMC11487202.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimalsPHPublic Health
    8. Decoding the exposome: data science methodologies and implications in exposome-wide association studies (ExWASs). Exposome. 2024; 4(1):osae001. Chung MK, House JS, Akhtari FS, Makris KC, Langston MA, Islam KT, Holmes P, Chadeau-Hyam M, Smirnov AI, Du X, Thessen AE, Cui Y, Zhang K, Manrai AK, Motsinger-Reif A, Patel CJ, Members of the Exposomics Consortium . PMID: 38344436; PMCID: PMC10857773.
      View in: PubMed   Mentions: 32  
    9. TET1 regulates responses to house dust mite by altering chromatin accessibility, DNA methylation, and gene expression in airway epithelial cells. Res Sq. 2023 Dec 13. Brown AP, Parameswaran S, Cai L, Elston S, Pham C, Barski A, Weirauch MT, Ji H. PMID: 38168374; PMCID: PMC10760239.
      View in: PubMed   Mentions:
    10. The "epiTet" of Air Pollution: Epigenetic Regulation of Airway Inflammation by Tet1. Int Arch Allergy Immunol. 2023; 184(9):949-952. Ji H, Brown AP, Henson SN, Haczku A. PMID: 37276849; PMCID: PMC10530385.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCellsPHPublic Health
    11. Single-Cell RNA-Seq Analysis Reveals Lung Epithelial Cell Type-Specific Responses to HDM and Regulation by Tet1. Genes (Basel). 2022 05 14; 13(5). Zhu T, Brown AP, Cai LP, Quon G, Ji H. PMID: 35627266; PMCID: PMC9140484.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    12. Long-term effects of wildfire smoke exposure during early life on the nasal epigenome in rhesus macaques. Environ Int. 2022 01; 158:106993. Brown AP, Cai L, Laufer BI, Miller LA, LaSalle JM, Ji H. PMID: 34991254; PMCID: PMC8852822.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsPHPublic Health
    13. Adoptive transfer of bone marrow-derived dendritic cells (BMDCs) alleviates OVA-induced allergic airway inflammation in asthmatic mice. Sci Rep. 2020 08 17; 10(1):13915. Xu K, Wu N, Min Z, Li Z, Zhu T, Liu C, Zeng Y, Song J, Mao R, Ji H, Jiang Z, Chen Z. PMID: 32807859; PMCID: PMC7431555.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    14. The Emerging Role of Ten-Eleven Translocation 1 in Epigenetic Responses to Environmental Exposures. Epigenet Insights. 2020; 13:2516865720910155. Zhu T, Brown AP, Ji H. PMID: 32166220; PMCID: PMC7054729.
      View in: PubMed   Mentions: 11  
    15. TET1 contributes to allergic airway inflammation and regulates interferon and aryl hydrocarbon receptor signaling pathways in bronchial epithelial cells. Sci Rep. 2019 05 14; 9(1):7361. Burleson JD, Siniard D, Yadagiri VK, Chen X, Weirauch MT, Ruff BP, Brandt EB, Hershey GKK, Ji H. PMID: 31089182; PMCID: PMC6517446.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansAnimalsCells
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