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Soichiro Yamada

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InstitutionUniversity of California Davis
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Cheah JS, Yamada S. A simple elution strategy for biotinylated proteins bound to streptavidin conjugated beads using excess biotin and heat. Biochem Biophys Res Commun. 2017 12 02; 493(4):1522-1527. PMID: 28986262.
      View in: PubMed
    2. Renner DJ, Ewald ML, Kim T, Yamada S. Biochemical analysis of force-sensitive responses using a large-scale cell stretch device. Cell Adh Migr. 2017 Sep 03; 11(5-6):504-513. PMID: 28129019.
      View in: PubMed
    3. Lee E, Ewald ML, Sedarous M, Kim T, Weyers BW, Truong RH, Yamada S. Deletion of the cytoplasmic domain of N-cadherin reduces, but does not eliminate, traction force-transmission. Biochem Biophys Res Commun. 2016 09 30; 478(4):1640-6. PMID: 27596967.
      View in: PubMed
    4. Lee JK, Hu JC, Yamada S, Athanasiou KA. Initiation of Chondrocyte Self-Assembly Requires an Intact Cytoskeletal Network. Tissue Eng Part A. 2016 Feb; 22(3-4):318-25. PMID: 26729374; PMCID: PMC4779322 [Available on 02/01/17].
    5. Ueda S, Blee AM, Macway KG, Renner DJ, Yamada S. Force dependent biotinylation of myosin IIA by a-catenin tagged with a promiscuous biotin ligase. PLoS One. 2015; 10(3):e0122886. PMID: 25806963; PMCID: PMC4373798.
    6. Sumida GM, Yamada S. Rho GTPases and the downstream effectors actin-related protein 2/3 (Arp2/3) complex and myosin II induce membrane fusion at self-contacts. J Biol Chem. 2015 Feb 06; 290(6):3238-47. PMID: 25527498; PMCID: PMC4318998.
    7. Sumida GM, Yamada S. Self-contact elimination by membrane fusion. Proc Natl Acad Sci U S A. 2013 Nov 19; 110(47):18958-63. PMID: 24191042; PMCID: PMC3839738.
    8. Jorrisch MH, Shih W, Yamada S. Myosin IIA deficient cells migrate efficiently despite reduced traction forces at cell periphery. Biol Open. 2013 Apr 15; 2(4):368-72. PMID: 23616920; PMCID: PMC3625864.
    9. Cui Y, Yamada S. N-cadherin dependent collective cell invasion of prostate cancer cells is regulated by the N-terminus of a-catenin. PLoS One. 2013; 8(1):e55069. PMID: 23359820; PMCID: PMC3554680.
    10. Shih W, Yamada S. N-cadherin as a key regulator of collective cell migration in a 3D environment. Cell Adh Migr. 2012 Nov-Dec; 6(6):513-7. PMID: 23076138; PMCID: PMC3547896.
    11. Zhang H, Li N, Sirish P, Mahakian L, Ingham E, Curry FR, Yamada S, Chiamvimonvat N, Ferrara KW. The cargo of CRPPR-conjugated liposomes crosses the intact murine cardiac endothelium. J Control Release. 2012 Oct 10; 163(1):10-7. PMID: 22776291; PMCID: PMC3552610.
    12. Steele AN, Sumida GM, Yamada S. Tandem zyxin LIM sequences do not enhance force sensitive accumulation. Biochem Biophys Res Commun. 2012 Jun 15; 422(4):653-7. PMID: 22609203; PMCID: PMC3377793.
    13. Shih W, Yamada S. N-cadherin-mediated cell-cell adhesion promotes cell migration in a three-dimensional matrix. J Cell Sci. 2012 Aug 01; 125(Pt 15):3661-70. PMID: 22467866; PMCID: PMC3445327.
    14. Li L, Hartley R, Reiss B, Sun Y, Pu J, Wu D, Lin F, Hoang T, Yamada S, Jiang J, Zhao M. E-cadherin plays an essential role in collective directional migration of large epithelial sheets. Cell Mol Life Sci. 2012 Aug; 69(16):2779-89. PMID: 22410739; PMCID: PMC3459324.
    15. Shih W, Yamada S. Live-cell imaging of migrating cells expressing fluorescently-tagged proteins in a three-dimensional matrix. J Vis Exp. 2011 Dec 22; (58). PMID: 22215133; PMCID: PMC3369670.
    16. Sumida GM, Tomita TM, Shih W, Yamada S. Myosin II activity dependent and independent vinculin recruitment to the sites of E-cadherin-mediated cell-cell adhesion. BMC Cell Biol. 2011 Nov 03; 12:48. PMID: 22054176; PMCID: PMC3215179.
    17. Uemura A, Nguyen TN, Steele AN, Yamada S. The LIM domain of zyxin is sufficient for force-induced accumulation of zyxin during cell migration. Biophys J. 2011 Sep 07; 101(5):1069-75. PMID: 21889443; PMCID: PMC3164133.
    18. Ounkomol C, Yamada S, Heinrich V. Single-cell adhesion tests against functionalized microspheres arrayed on AFM cantilevers confirm heterophilic E- and N-cadherin binding. Biophys J. 2010 Dec 15; 99(12):L100-2. PMID: 21156120; PMCID: PMC3000485.
    19. Nguyen TN, Uemura A, Shih W, Yamada S. Zyxin-mediated actin assembly is required for efficient wound closure. J Biol Chem. 2010 Nov 12; 285(46):35439-45. PMID: 20801875; PMCID: PMC2975167.
    20. Shih W, Yamada S. Myosin IIA dependent retrograde flow drives 3D cell migration. Biophys J. 2010 Apr 21; 98(8):L29-31. PMID: 20409454; PMCID: PMC2856159.
    21. Pokutta S, Drees F, Yamada S, Nelson WJ, Weis WI. Biochemical and structural analysis of alpha-catenin in cell-cell contacts. Biochem Soc Trans. 2008 Apr; 36(Pt 2):141-7. PMID: 18363554; PMCID: PMC3369830.
    22. Yamada S, Nelson WJ. Localized zones of Rho and Rac activities drive initiation and expansion of epithelial cell-cell adhesion. J Cell Biol. 2007 Jul 30; 178(3):517-27. PMID: 17646397; PMCID: PMC2064836.
    23. Yamada S, Nelson WJ. Synapses: sites of cell recognition, adhesion, and functional specification. Annu Rev Biochem. 2007; 76:267-94. PMID: 17506641; PMCID: PMC3368613.
    24. Yamada S, Pokutta S, Drees F, Weis WI, Nelson WJ. Deconstructing the cadherin-catenin-actin complex. Cell. 2005 Dec 02; 123(5):889-901. PMID: 16325582; PMCID: PMC3368712.
    25. Drees F, Pokutta S, Yamada S, Nelson WJ, Weis WI. Alpha-catenin is a molecular switch that binds E-cadherin-beta-catenin and regulates actin-filament assembly. Cell. 2005 Dec 02; 123(5):903-15. PMID: 16325583; PMCID: PMC3369825.
    26. Reilein A, Yamada S, Nelson WJ. Self-organization of an acentrosomal microtubule network at the basal cortex of polarized epithelial cells. J Cell Biol. 2005 Dec 05; 171(5):845-55. PMID: 16314429; PMCID: PMC2171299.
    27. Nelson WJ, Drees F, Yamada S. Interaction of cadherin with the actin cytoskeleton. Novartis Found Symp. 2005; 269:159-68; discussion 168-77, 223-30. PMID: 16358407.
      View in: PubMed