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Cecilia Penedo

Title(s)Researcher, SCHOOL OF VETERINARY MEDICINE
SchoolUniversity of California, Davis
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Tanaka J, Leeb T, Rushton J, Famula TR, Mack M, Jagannathan V, Flury C, Bachmann I, Eberth J, McDonnell SM, Penedo MCT, Bellone RR. Frameshift Variant in MFSD12 Explains the Mushroom Coat Color Dilution in Shetland Ponies. Genes (Basel). 2019 10 19; 10(10). PMID: 31635058.
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    2. Bellone RR, Ocampo NR, Hughes SS, Le V, Arthur R, Finno CJ, Penedo MCT. Warmblood fragile foal syndrome type 1 mutation (PLOD1 c.2032G>A) is not associated with catastrophic breakdown and has a low allele frequency in the Thoroughbred breed. Equine Vet J. 2019 Sep 10. PMID: 31502696.
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    3. Ginja C, Gama LT, Cortés O, Burriel IM, Vega-Pla JL, Penedo C, Sponenberg P, Cañón J, Sanz A, do Egito AA, Alvarez LA, Giovambattista G, Agha S, Rogberg-Muñoz A, Lara MAC, Delgado JV, Martinez A. The genetic ancestry of American Creole cattle inferred from uniparental and autosomal genetic markers. Sci Rep. 2019 Aug 07; 9(1):11486. PMID: 31391486.
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    4. Ontiveros ES, Hughes S, Penedo MCT, Grahn RA, Stern JA. Genetic heterogeneity and diversity of North American golden retrievers using a low density STR marker panel. PLoS One. 2019; 14(2):e0212171. PMID: 30811441.
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    5. Gianino GM, Valberg SJ, Perumbakkam S, Henry ML, Gardner K, Penedo C, Finno CJ. Prevalence of the E321G MYH1 variant for immune-mediated myositis and nonexertional rhabdomyolysis in performance subgroups of American Quarter Horses. J Vet Intern Med. 2019 Mar; 33(2):897-901. PMID: 30623495.
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    6. Shetty G, Mitchell JM, Lam TNA, Wu Z, Zhang J, Hill L, Tailor RC, Peters KA, Penedo MC, Orwig KE, Meistrich ML. Donor spermatogenesis in de novo formed seminiferous tubules from transplanted testicular cells in rhesus monkey testis. Hum Reprod. 2018 12 01; 33(12):2249-2255. PMID: 30358843.
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    7. Grady ST, Watts AE, Thompson JA, Penedo MCT, Konganti K, Hinrichs K. Effect of intra-ovarian injection of mesenchymal stem cells in aged mares. J Assist Reprod Genet. 2019 Mar; 36(3):543-556. PMID: 30470961.
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    8. Kun TJ, Wictum EJ, Penedo MCT. A mini-STR typing system for degraded equine DNA. Anim Genet. 2018 Oct; 49(5):464-466. PMID: 30117168.
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    9. Aleman M, Finno CJ, Weich K, Penedo MCT. Investigation of Known Genetic Mutations of Arabian Horses in Egyptian Arabian Foals with Juvenile Idiopathic Epilepsy. J Vet Intern Med. 2018 Jan; 32(1):465-468. PMID: 29171123.
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    10. Scott EY, Woolard KD, Finno CJ, Penedo MCT, Murray JD. Variation in MUTYH expression in Arabian horses with Cerebellar Abiotrophy. Brain Res. 2018 Jan 01; 1678:330-336. PMID: 29103988.
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    11. Mack M, Kowalski E, Grahn R, Bras D, Penedo MCT, Bellone R. Two Variants in SLC24A5 Are Associated with "Tiger-Eye" Iris Pigmentation in Puerto Rican Paso Fino Horses. G3 (Bethesda). 2017 08 07; 7(8):2799-2806. PMID: 28655738.
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    12. Schaefer RJ, Schubert M, Bailey E, Bannasch DL, Barrey E, Bar-Gal GK, Brem G, Brooks SA, Distl O, Fries R, Finno CJ, Gerber V, Haase B, Jagannathan V, Kalbfleisch T, Leeb T, Lindgren G, Lopes MS, Mach N, da Câmara Machado A, MacLeod JN, McCoy A, Metzger J, Penedo C, Polani S, Rieder S, Tammen I, Tetens J, Thaller G, Verini-Supplizi A, Wade CM, Wallner B, Orlando L, Mickelson JR, McCue ME. Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds. BMC Genomics. 2017 07 27; 18(1):565. PMID: 28750625.
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    13. Scott EY, Mansour T, Bellone RR, Brown CT, Mienaltowski MJ, Penedo MC, Ross PJ, Valberg SJ, Murray JD, Finno CJ. Identification of long non-coding RNA in the horse transcriptome. BMC Genomics. 2017 07 04; 18(1):511. PMID: 28676104.
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    14. Bellone RR, Liu J, Petersen JL, Mack M, Singer-Berk M, Drögemüller C, Malvick J, Wallner B, Brem G, Penedo MC, Lassaline M. A missense mutation in damage-specific DNA binding protein 2 is a genetic risk factor for limbal squamous cell carcinoma in horses. Int J Cancer. 2017 07 15; 141(2):342-353. PMID: 28425625.
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    15. Scott EY, Penedo MCT, Murray JD, Finno CJ. Defining Trends in Global Gene Expression in Arabian Horses with Cerebellar Abiotrophy. Cerebellum. 2017 04; 16(2):462-472. PMID: 27709457.
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    16. Pelayo R, Penedo MCT, Valera M, Molina A, Millon L, Ginja C, Royo LJ. Identification of a new Y chromosome haplogroup in Spanish native cattle. Anim Genet. 2017 Aug; 48(4):450-454. PMID: 28244125.
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    17. Bordbari MH, Penedo MCT, Aleman M, Valberg SJ, Mickelson J, Finno CJ. Deletion of 2.7 kb near HOXD3 in an Arabian horse with occipitoatlantoaxial malformation. Anim Genet. 2017 Jun; 48(3):287-294. PMID: 28111759.
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    18. Mansour TA, Scott EY, Finno CJ, Bellone RR, Mienaltowski MJ, Penedo MC, Ross PJ, Valberg SJ, Murray JD, Brown CT. Tissue resolved, gene structure refined equine transcriptome. BMC Genomics. 2017 01 20; 18(1):103. PMID: 28107812.
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    19. Murgiano L, Waluk DP, Towers R, Wiedemar N, Dietrich J, Jagannathan V, Drögemüller M, Balmer P, Druet T, Galichet A, Penedo MC, Müller EJ, Roosje P, Welle MM, Leeb T. An Intronic MBTPS2 Variant Results in a Splicing Defect in Horses with Brindle Coat Texture. G3 (Bethesda). 2016 09 08; 6(9):2963-70. PMID: 27449517.
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    20. Imsland F, McGowan K, Rubin CJ, Henegar C, Sundström E, Berglund J, Schwochow D, Gustafson U, Imsland P, Lindblad-Toh K, Lindgren G, Mikko S, Millon L, Wade C, Schubert M, Orlando L, Penedo MC, Barsh GS, Andersson L. Regulatory mutations in TBX3 disrupt asymmetric hair pigmentation that underlies Dun camouflage color in horses. Nat Genet. 2016 Feb; 48(2):152-8. PMID: 26691985.
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    21. Holl HM, Brooks SA, Archer S, Brown K, Malvick J, Penedo MC, Bellone RR. Variant in the RFWD3 gene associated with PATN1, a modifier of leopard complex spotting. Anim Genet. 2016 Feb; 47(1):91-101. PMID: 26568529.
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    22. Gershony LC, Penedo MC, Davis BW, Murphy WJ, Helps CR, Lyons LA. Who's behind that mask and cape? The Asian leopard cat's Agouti (ASIP) allele likely affects coat colour phenotype in the Bengal cat breed. Anim Genet. 2014 Dec; 45(6):893-7. PMID: 25143047.
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    23. Promerová M, Andersson LS, Juras R, Penedo MC, Reissmann M, Tozaki T, Bellone R, Dunner S, Horín P, Imsland F, Imsland P, Mikko S, Modrý D, Roed KH, Schwochow D, Vega-Pla JL, Mehrabani-Yeganeh H, Yousefi-Mashouf N, G Cothran E, Lindgren G, Andersson L. Worldwide frequency distribution of the 'Gait keeper' mutation in the DMRT3 gene. Anim Genet. 2014 Apr; 45(2):274-82. PMID: 24444049.
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    24. Ginja C, Gama LT, Cortes O, Delgado JV, Dunner S, García D, Landi V, Martín-Burriel I, Martínez-Martínez A, Penedo MC, Rodellar C, Zaragoza P, Cañon J. Analysis of conservation priorities of Iberoamerican cattle based on autosomal microsatellite markers. Genet Sel Evol. 2013 Sep 30; 45:35. PMID: 24079454.
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    25. McClure MC, Sonstegard TS, Wiggans GR, Van Eenennaam AL, Weber KL, Penedo CT, Berry DP, Flynn J, Garcia JF, Carmo AS, Regitano LC, Albuquerque M, Silva MV, Machado MA, Coffey M, Moore K, Boscher MY, Genestout L, Mazza R, Taylor JF, Schnabel RD, Simpson B, Marques E, McEwan JC, Cromie A, Coutinho LL, Kuehn LA, Keele JW, Piper EK, Cook J, Williams R, Van Tassell CP. Imputation of microsatellite alleles from dense SNP genotypes for parentage verification across multiple Bos taurus and Bos indicus breeds. Front Genet. 2013; 4:176. PMID: 24065982.
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    26. Hauswirth R, Jude R, Haase B, Bellone RR, Archer S, Holl H, Brooks SA, Tozaki T, Penedo MC, Rieder S, Leeb T. Novel variants in the KIT and PAX3 genes in horses with white-spotted coat colour phenotypes. Anim Genet. 2013 Dec; 44(6):763-5. PMID: 23659293.
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    27. Petersen JL, Mickelson JR, Cothran EG, Andersson LS, Axelsson J, Bailey E, Bannasch D, Binns MM, Borges AS, Brama P, da Câmara Machado A, Distl O, Felicetti M, Fox-Clipsham L, Graves KT, Guérin G, Haase B, Hasegawa T, Hemmann K, Hill EW, Leeb T, Lindgren G, Lohi H, Lopes MS, McGivney BA, Mikko S, Orr N, Penedo MC, Piercy RJ, Raekallio M, Rieder S, Røed KH, Silvestrelli M, Swinburne J, Tozaki T, Vaudin M, M Wade C, McCue ME. Genetic diversity in the modern horse illustrated from genome-wide SNP data. PLoS One. 2013; 8(1):e54997. PMID: 23383025.
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    28. Petersen JL, Mickelson JR, Rendahl AK, Valberg SJ, Andersson LS, Axelsson J, Bailey E, Bannasch D, Binns MM, Borges AS, Brama P, da Câmara Machado A, Capomaccio S, Cappelli K, Cothran EG, Distl O, Fox-Clipsham L, Graves KT, Guérin G, Haase B, Hasegawa T, Hemmann K, Hill EW, Leeb T, Lindgren G, Lohi H, Lopes MS, McGivney BA, Mikko S, Orr N, Penedo MC, Piercy RJ, Raekallio M, Rieder S, Røed KH, Swinburne J, Tozaki T, Vaudin M, Wade CM, McCue ME. Genome-wide analysis reveals selection for important traits in domestic horse breeds. PLoS Genet. 2013; 9(1):e1003211. PMID: 23349635.
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    29. Martínez AM, Gama LT, Cañón J, Ginja C, Delgado JV, Dunner S, Landi V, Martín-Burriel I, Penedo MC, Rodellar C, Vega-Pla JL, Acosta A, Alvarez LA, Camacho E, Cortés O, Marques JR, Martínez R, Martínez RD, Melucci L, Martínez-Velázquez G, Muñoz JE, Postiglioni A, Quiroz J, Sponenberg P, Uffo O, Villalobos A, Zambrano D, Zaragoza P. Genetic footprints of Iberian cattle in America 500 years after the arrival of Columbus. PLoS One. 2012; 7(11):e49066. PMID: 23155451.
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    30. Hermann BP, Sukhwani M, Winkler F, Pascarella JN, Peters KA, Sheng Y, Valli H, Rodriguez M, Ezzelarab M, Dargo G, Peterson K, Masterson K, Ramsey C, Ward T, Lienesch M, Volk A, Cooper DK, Thomson AW, Kiss JE, Penedo MC, Schatten GP, Mitalipov S, Orwig KE. Spermatogonial stem cell transplantation into rhesus testes regenerates spermatogenesis producing functional sperm. Cell Stem Cell. 2012 Nov 02; 11(5):715-26. PMID: 23122294.
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    31. Grahn RA, Grahn JC, Penedo MC, Helps CR, Lyons LA. Erythrocyte pyruvate kinase deficiency mutation identified in multiple breeds of domestic cats. BMC Vet Res. 2012 Oct 30; 8:207. PMID: 23110753.
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    32. Kanthaswamy S, Ng J, Penedo MC, Ward T, Smith DG, Ha JC. Population genetics of the Washington National Primate Research Center's (WaNPRC) captive pigtailed macaque (Macaca nemestrina) population. Am J Primatol. 2012 Nov; 74(11):1017-27. PMID: 22851336.
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    33. Bonfiglio S, Ginja C, De Gaetano A, Achilli A, Olivieri A, Colli L, Tesfaye K, Agha SH, Gama LT, Cattonaro F, Penedo MC, Ajmone-Marsan P, Torroni A, Ferretti L. Origin and spread of Bos taurus: new clues from mitochondrial genomes belonging to haplogroup T1. PLoS One. 2012; 7(6):e38601. PMID: 22685589.
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    34. Hauswirth R, Haase B, Blatter M, Brooks SA, Burger D, Drögemüller C, Gerber V, Henke D, Janda J, Jude R, Magdesian KG, Matthews JM, Poncet PA, Svansson V, Tozaki T, Wilkinson-White L, Penedo MC, Rieder S, Leeb T. Mutations in MITF and PAX3 cause "splashed white" and other white spotting phenotypes in horses. PLoS Genet. 2012; 8(4):e1002653. PMID: 22511888.
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    35. Achilli A, Olivieri A, Soares P, Lancioni H, Hooshiar Kashani B, Perego UA, Nergadze SG, Carossa V, Santagostino M, Capomaccio S, Felicetti M, Al-Achkar W, Penedo MC, Verini-Supplizi A, Houshmand M, Woodward SR, Semino O, Silvestrelli M, Giulotto E, Pereira L, Bandelt HJ, Torroni A. Mitochondrial genomes from modern horses reveal the major haplogroups that underwent domestication. Proc Natl Acad Sci U S A. 2012 Feb 14; 109(7):2449-54. PMID: 22308342.
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    36. Capitanio JP, Del Rosso LA, Calonder LA, Blozis SA, Penedo MC. Behavioral effects of prenatal ketamine exposure in rhesus macaques are dependent on MAOA genotype. Exp Clin Psychopharmacol. 2012 Jun; 20(3):173-80. PMID: 22250657.
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    37. McCue ME, Bannasch DL, Petersen JL, Gurr J, Bailey E, Binns MM, Distl O, Guérin G, Hasegawa T, Hill EW, Leeb T, Lindgren G, Penedo MC, Røed KH, Ryder OA, Swinburne JE, Tozaki T, Valberg SJ, Vaudin M, Lindblad-Toh K, Wade CM, Mickelson JR. A high density SNP array for the domestic horse and extant Perissodactyla: utility for association mapping, genetic diversity, and phylogeny studies. PLoS Genet. 2012 Jan; 8(1):e1002451. PMID: 22253606.
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    38. Tachibana M, Sparman M, Ramsey C, Ma H, Lee HS, Penedo MC, Mitalipov S. Generation of chimeric rhesus monkeys. Cell. 2012 Jan 20; 148(1-2):285-95. PMID: 22225614.
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    39. Johnson ZP, Eady RD, Ahmad SF, Agravat S, Morris T, Else J, Lank SM, Wiseman RW, O'Connor DH, Penedo MC, Larsen CP, Kean LS. Immunogenetic Management Software: a new tool for visualization and analysis of complex immunogenetic datasets. Immunogenetics. 2012 Apr; 64(4):329-36. PMID: 22080300.
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    40. Cañón J, García D, Delgado JV, Dunner S, Telo da Gama L, Landi V, Martín-Burriel I, Martínez A, Penedo C, Rodellar C, Zaragoza P, Ginja C. Relative breed contributions to neutral genetic diversity of a comprehensive representation of Iberian native cattle. Animal. 2011 Aug; 5(9):1323-34. PMID: 22440277.
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    41. Brault LS, Famula TR, Penedo MC. Inheritance of cerebellar abiotrophy in Arabians. Am J Vet Res. 2011 Jul; 72(7):940-4. PMID: 21728855.
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    42. Delgado JV, Martínez AM, Acosta A, Alvarez LA, Armstrong E, Camacho E, Cañón J, Cortés O, Dunner S, Landi V, Marques JR, Martín-Burriel I, Martínez OR, Martínez RD, Melucci L, Muñoz JE, Penedo MC, Postiglioni A, Quiróz J, Rodellar C, Sponenberg P, Uffo O, Ulloa-Arvizu R, Vega-Pla JL, Villalobos A, Zambrano D, Zaragoza P, Gama LT, Ginja C. Genetic characterization of Latin-American Creole cattle using microsatellite markers. Anim Genet. 2012 Feb; 43(1):2-10. PMID: 22221019.
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    43. Martín-Burriel I, Rodellar C, Cañón J, Cortés O, Dunner S, Landi V, Martínez-Martínez A, Gama LT, Ginja C, Penedo MC, Sanz A, Zaragoza P, Delgado JV. Genetic diversity, structure, and breed relationships in Iberian cattle. J Anim Sci. 2011 Apr; 89(4):893-906. PMID: 21415418.
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    44. Brault LS, Penedo MC. The frequency of the equine cerebellar abiotrophy mutation in non-Arabian horse breeds. Equine Vet J. 2011 Nov; 43(6):727-31. PMID: 21496100.
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    45. Pérez-Pardal L, Ginja C, Royo LJ, Álvarez I, Fernández I, del Valle A, Traoré A, Ponce de León FA, Beja-Pereira A, Penedo MC, Goyache F. Genetic structure of the bovine Y-specific microsatellite UMN0103 reflects the genetic history of the species. Anim Genet. 2011 Oct; 42(5):566-7. PMID: 21906111.
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    46. Haase B, Rieder S, Tozaki T, Hasegawa T, Penedo MC, Jude R, Leeb T. Five novel KIT mutations in horses with white coat colour phenotypes. Anim Genet. 2011 Jun; 42(3):337-9. PMID: 21554354.
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    47. Boyce WM, Weisenberger ME, Penedo MC, Johnson CK. Wildlife translocation: the conservation implications of pathogen exposure and genetic heterozygosity. BMC Ecol. 2011 Feb 01; 11:5. PMID: 21284886.
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    48. Edwards CJ, Ginja C, Kantanen J, Pérez-Pardal L, Tresset A, Stock F, Gama LT, Penedo MC, Bradley DG, Lenstra JA, Nijman IJ. Dual origins of dairy cattle farming--evidence from a comprehensive survey of European Y-chromosomal variation. PLoS One. 2011 Jan 06; 6(1):e15922. PMID: 21253012.
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    49. McCue ME, Anderson SM, Valberg SJ, Piercy RJ, Barakzai SZ, Binns MM, Distl O, Penedo MC, Wagner ML, Mickelson JR. Estimated prevalence of the Type 1 Polysaccharide Storage Myopathy mutation in selected North American and European breeds. Anim Genet. 2010 Dec; 41 Suppl 2:145-9. PMID: 21070288.
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    50. Brault LS, Cooper CA, Famula TR, Murray JD, Penedo MC. Mapping of equine cerebellar abiotrophy to ECA2 and identification of a potential causative mutation affecting expression of MUTYH. Genomics. 2011 Feb; 97(2):121-9. PMID: 21126570.
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    51. Larsen CP, Page A, Linzie KH, Russell M, Deane T, Stempora L, Strobert E, Penedo MC, Ward T, Wiseman R, O'Connor D, Miller W, Sen S, Singh K, Kean LS. An MHC-defined primate model reveals significant rejection of bone marrow after mixed chimerism induction despite full MHC matching. Am J Transplant. 2010 Nov; 10(11):2396-409. PMID: 20849552.
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    52. Miller WP, Srinivasan S, Panoskaltsis-Mortari A, Singh K, Sen S, Hamby K, Deane T, Stempora L, Beus J, Turner A, Wheeler C, Anderson DC, Sharma P, Garcia A, Strobert E, Elder E, Crocker I, Crenshaw T, Penedo MC, Ward T, Song M, Horan J, Larsen CP, Blazar BR, Kean LS. GVHD after haploidentical transplantation: a novel, MHC-defined rhesus macaque model identifies CD28- CD8+ T cells as a reservoir of breakthrough T-cell proliferation during costimulation blockade and sirolimus-based immunosuppression. Blood. 2010 Dec 09; 116(24):5403-18. PMID: 20833977.
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    53. Ginja C, Penedo MC, Sobral MF, Matos J, Borges C, Neves D, Rangel-Figueiredo T, Cravador A. Molecular genetic analysis of a cattle population to reconstitute the extinct Algarvia breed. Genet Sel Evol. 2010 Jun 11; 42:18. PMID: 20540741.
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    54. Kanthaswamy S, Kou A, Satkoski J, Penedo MC, Ward T, Ng J, Gill L, Lerche NW, Erickson BJ, Smith DG. Genetic characterization of specific pathogen-free rhesus macaque (Macaca mulatta) populations at the California National Primate Research Center (CNPRC). Am J Primatol. 2010 Jun; 72(7):587-99. PMID: 20162538.
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    55. Ginja C, Telo Da Gama L, Penedo MC. Analysis of STR markers reveals high genetic structure in Portuguese native cattle. J Hered. 2010 Mar-Apr; 101(2):201-10. PMID: 19965912.
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    56. Wade CM, Giulotto E, Sigurdsson S, Zoli M, Gnerre S, Imsland F, Lear TL, Adelson DL, Bailey E, Bellone RR, Blöcker H, Distl O, Edgar RC, Garber M, Leeb T, Mauceli E, MacLeod JN, Penedo MC, Raison JM, Sharpe T, Vogel J, Andersson L, Antczak DF, Biagi T, Binns MM, Chowdhary BP, Coleman SJ, Della Valle G, Fryc S, Guérin G, Hasegawa T, Hill EW, Jurka J, Kiialainen A, Lindgren G, Liu J, Magnani E, Mickelson JR, Murray J, Nergadze SG, Onofrio R, Pedroni S, Piras MF, Raudsepp T, Rocchi M, Røed KH, Ryder OA, Searle S, Skow L, Swinburne JE, Syvänen AC, Tozaki T, Valberg SJ, Vaudin M, White JR, Zody MC, Lander ES, Lindblad-Toh K. Genome sequence, comparative analysis, and population genetics of the domestic horse. Science. 2009 Nov 06; 326(5954):865-7. PMID: 19892987.
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    57. Ginja C, Penedo MC, Melucci L, Quiroz J, Martínez López OR, Revidatti MA, Martínez-Martínez A, Delgado JV, Gama LT. Origins and genetic diversity of New World Creole cattle: inferences from mitochondrial and Y chromosome polymorphisms. Anim Genet. 2010 Apr; 41(2):128-41. PMID: 19817725.
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    58. Maga EA, Daftari P, Kültz D, Penedo MC. Prevalence of alphas1-casein genotypes in American dairy goats. J Anim Sci. 2009 Nov; 87(11):3464-9. PMID: 19648483.
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    59. Haase B, Brooks SA, Tozaki T, Burger D, Poncet PA, Rieder S, Hasegawa T, Penedo C, Leeb T. Seven novel KIT mutations in horses with white coat colour phenotypes. Anim Genet. 2009 Oct; 40(5):623-9. PMID: 19456317.
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    60. Simerly CR, Navara CS, Castro CA, Turpin JC, Redinger CJ, Mich-Basso JD, Jacoby ES, Grund KJ, McFarland DA, Oliver SL, Ben-Yehudah A, Carlisle DL, Frost P, Penedo C, Hewitson L, Schatten G. Establishment and characterization of baboon embryonic stem cell lines: an Old World Primate model for regeneration and transplantation research. Stem Cell Res. 2009 May; 2(3):178-87. PMID: 19393591.
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    61. Tryon RC, Penedo MC, McCue ME, Valberg SJ, Mickelson JR, Famula TR, Wagner ML, Jackson M, Hamilton MJ, Nooteboom S, Bannasch DL. Evaluation of allele frequencies of inherited disease genes in subgroups of American Quarter Horses. J Am Vet Med Assoc. 2009 Jan 01; 234(1):120-5. PMID: 19119976.
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    62. Raudsepp T, Gustafson-Seabury A, Durkin K, Wagner ML, Goh G, Seabury CM, Brinkmeyer-Langford C, Lee EJ, Agarwala R, Stallknecht-Rice E, Schäffer AA, Skow LC, Tozaki T, Yasue H, Penedo MC, Lyons LA, Khazanehdari KA, Binns MM, MacLeod JN, Distl O, Guérin G, Leeb T, Mickelson JR, Chowdhary BP. A 4,103 marker integrated physical and comparative map of the horse genome. Cytogenet Genome Res. 2008; 122(1):28-36. PMID: 18931483.
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    63. Ginja C, Telo da Gama L, Penedo MC. Y chromosome haplotype analysis in Portuguese cattle breeds using SNPs and STRs. J Hered. 2009 Mar-Apr; 100(2):148-57. PMID: 18832111.
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    64. Dighe V, Clepper L, Pedersen D, Byrne J, Ferguson B, Gokhale S, Penedo MC, Wolf D, Mitalipov S. Heterozygous embryonic stem cell lines derived from nonhuman primate parthenotes. Stem Cells. 2008 Mar; 26(3):756-66. PMID: 18192229.
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    65. Van Eenennaam AL, Weaber RL, Drake DJ, Penedo MC, Quaas RL, Garrick DJ, Pollak EJ. DNA-based paternity analysis and genetic evaluation in a large, commercial cattle ranch setting. J Anim Sci. 2007 Dec; 85(12):3159-69. PMID: 17878282.
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    66. Evans JJ, Wictum EJ, Penedo MC, Kanthaswamy S. Real-time polymerase chain reaction quantification of canine DNA. J Forensic Sci. 2007 Jan; 52(1):93-6. PMID: 17209917.
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    67. Wagner ML, Valberg SJ, Ames EG, Bauer MM, Wiseman JA, Penedo MC, Kinde H, Abbitt B, Mickelson JR. Allele frequency and likely impact of the glycogen branching enzyme deficiency gene in Quarter Horse and Paint Horse populations. J Vet Intern Med. 2006 Sep-Oct; 20(5):1207-11. PMID: 17063718.
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    68. Marcondes MC, Penedo MC, Lanigan C, Hall D, Watry DD, Zandonatti M, Fox HS. Simian immunodeficiency virus-induced CD4+ T cell deficits in cytokine secretion profile are dependent on monkey origin. Viral Immunol. 2006; 19(4):679-89. PMID: 17201663.
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    69. Burdo TH, Marcondes MC, Lanigan CM, Penedo MC, Fox HS. Susceptibility of Chinese rhesus monkeys to SIV infection. AIDS. 2005 Oct 14; 19(15):1704-6. PMID: 16184046.
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    70. Penedo MC, Bontrop RE, Heijmans CM, Otting N, Noort R, Rouweler AJ, de Groot N, de Groot NG, Ward T, Doxiadis GG. Microsatellite typing of the rhesus macaque MHC region. Immunogenetics. 2005 May; 57(3-4):198-209. PMID: 15900491.
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    71. Bricker SJ, Brault LS, DelValle A, Millon LV, Murray JD, Penedo MC. Radiation hybrid and linkage mapping of six new type I markers in the horse. Anim Genet. 2005 Apr; 36(2):182-4. PMID: 15771743.
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    73. Tozaki T, Penedo MC, Oliveira RP, Katz JP, Millon LV, Ward T, Pettigrew DC, Brault LS, Tomita M, Kurosawa M, Hasegawa T, Hirota K. Isolation, characterization and chromosome assignment of 341 newly isolated equine TKY microsatellite markers. Anim Genet. 2004 Dec; 35(6):487-96. PMID: 15566484.
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    74. Mateus JC, Eding H, Penedo MC, Rangel-Figueiredo MT. Contributions of Portuguese cattle breeds to genetic diversity using marker-estimated kinships. Anim Genet. 2004 Aug; 35(4):305-13. PMID: 15265070.
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    75. Rui R, Shim H, Moyer AL, Anderson DL, Penedo CT, Rowe JD, BonDurant RH, Anderson GB. Attempts to enhance production of porcine chimeras from embryonic germ cells and preimplantation embryos. Theriogenology. 2004 May; 61(7-8):1225-35. PMID: 15036957.
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    76. Andrade MC, Penedo MC, Ward T, Silva VF, Bertolini LR, Roberts JA, Leite JP, Cabello PH. Determination of genetic status in a closed colony of rhesus monkeys (Macaca mulatta). Primates. 2004 Jul; 45(3):183-6. PMID: 15103562.
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    77. Mateus JC, Penedo MC, Alves VC, Ramos M, Rangel-Figueiredo T. Genetic diversity and differentiation in Portuguese cattle breeds using microsatellites. Anim Genet. 2004 Apr; 35(2):106-13. PMID: 15025569.
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    78. Honaramooz A, Li MW, Penedo MC, Meyers S, Dobrinski I. Accelerated maturation of primate testis by xenografting into mice. Biol Reprod. 2004 May; 70(5):1500-3. PMID: 14736818.
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    79. Locke MM, Penedo MC, Bricker SJ, Millon LV, Murray JD. Linkage of the grey coat colour locus to microsatellites on horse chromosome 25. Anim Genet. 2002 Oct; 33(5):329-37. PMID: 12354140.
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    80. Mariasegaram M, Pullenayegum S, Jahabar Ali M, Shah RS, Penedo MC, Wernery U, Sasse J. Isolation and characterization of eight microsatellite markers in Camelus dromedarius and cross-species amplification in C. bactrianus and Lama pacos. Anim Genet. 2002 Oct; 33(5):385-7. PMID: 12354152.
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    81. Ling B, Veazey RS, Penedo C, Xu K, Lifson JD, Marx PA. Longitudinal follow up of SIVmac pathogenesis in rhesus macaques of Chinese origin: emergence of B cell lymphoma. J Med Primatol. 2002 Aug; 31(4-5):154-63. PMID: 12390537.
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    82. Ling B, Veazey RS, Luckay A, Penedo C, Xu K, Lifson JD, Marx PA. SIV(mac) pathogenesis in rhesus macaques of Chinese and Indian origin compared with primary HIV infections in humans. AIDS. 2002 Jul 26; 16(11):1489-96. PMID: 12131186.
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    83. Locke MM, Ruth LS, Millon LV, Penedo MC, Murray JD, Bowling AT. The cream dilution gene, responsible for the palomino and buckskin coat colours, maps to horse chromosome 21. Anim Genet. 2001 Dec; 32(6):340-3. PMID: 11736803.
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    84. Marthas ML, Lu D, Penedo MC, Hendrickx AG, Miller CJ. Titration of an SIVmac251 stock by vaginal inoculation of Indian and Chinese origin rhesus macaques: transmission efficiency, viral loads, and antibody responses. AIDS Res Hum Retroviruses. 2001 Oct 10; 17(15):1455-66. PMID: 11679158.
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    85. Penedo MC, Caetano AR, Cordova KI. Six microsatellite markers for South American camelids. Anim Genet. 1999 Oct; 30(5):399. PMID: 10582304.
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    86. Senese C, Penedo MC, Shiue YL, Bowling AT, Millon LV. A HaeIII PCR-RFLP in the ZFY/ZFX genes of horses. Anim Genet. 1999 Oct; 30(5):390-1. PMID: 10582293.
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    87. Kappes SM, Hines HC, Penedo MC, Keele JW. Linkage assignment of the last unmapped cattle erythrocyte antigen system, EAF. Anim Genet. 1999 Oct; 30(5):396. PMID: 10582299.
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    88. Penedo MC, Caetano AR, Cordova K. Eight microsatellite markers for South American camelids. Anim Genet. 1999 Apr; 30(2):166-7. PMID: 10376316.
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    89. Penedo MC, Caetano AR, Cordova KI. Microsatellite markers for South American camelids. Anim Genet. 1998 Oct; 29(5):411-2. PMID: 9800347.
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    90. Boyce WM, Hedrick PW, Muggli-Cockett NE, Kalinowski S, Penedo MC, Ramey RR. Genetic variation of major histocompatibility complex and microsatellite loci: a comparison in bighorn sheep. Genetics. 1997 Feb; 145(2):421-33. PMID: 9071595.
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    91. Kappes SM, Bishop MD, Keele JW, Penedo MC, Hines HC, Grosz MD, Hawkins GA, Stone RT, Sunden SL, Beattie CW. Linkage of bovine erythrocyte antigen loci B, C, L, S, Z, R' and T' and the serum protein loci post-transferrin 2 (PTF 2), vitamin D binding protein (GC) and albumin (ALB) to DNA microsatellite markers. Anim Genet. 1994 Jun; 25(3):133-40. PMID: 7943946.
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    92. Bowling AT, Penedo MC, Gordon L, Bell K. Equine plasminogen polymorphism: allelic frequencies in 23 breeds. Anim Genet. 1993 Dec; 24(6):437-8. PMID: 8273917.
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    93. Bowling AT, Gordon L, Penedo MC, Wictum E, Beebout J. A single gel for determining genetic variants of equine erythrocyte carbonic anhydrase (CA) and catalase (Cat). Anim Genet. 1990; 21(2):191-7. PMID: 2117407.
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    94. Penedo MC, Juneja RK. Polymorphic plasma postalbumin (Po) of llamas and alpacas identified as Gc protein. Anim Genet. 1989; 20(2):221-3. PMID: 2474262.
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    95. Juneja RK, Penedo MC, Larsson HE, Gahne B, Bowling AT. Two-dimensional electrophoresis of the plasma proteins of alpacas and llamas: genetic polymorphism of alpha 1B-glycoprotein and three other proteins. Anim Genet. 1989; 20(4):395-406. PMID: 2619106.
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    96. Penedo MC, Fowler ME, Bowling AT, Anderson DL, Gordon L. Genetic variation in the blood of llamas, Llama glama, and alpacas, Llama pacos. Anim Genet. 1988; 19(3):267-76. PMID: 3207220.
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    97. Butler JE, Anderson GB, BonDurant RH, Pashen RL, Penedo MC. Production of ovine chimeras by inner cell mass transplantation. J Anim Sci. 1987 Jul; 65(1):317-24. PMID: 3610876.
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    98. Polzin VJ, Anderson DL, Anderson GB, BonDurant RH, Butler JE, Pashen RL, Penedo MC, Rowe JD. Production of sheep-goat chimeras by inner cell mass transplantation. J Anim Sci. 1987 Jul; 65(1):325-30. PMID: 3610877.
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    99. Penedo MC, Mortari N, Magalhães LE. Carbonic anhydrase polymorphism in Indian Zebu cattle. Anim Blood Groups Biochem Genet. 1982; 13(2):141-3. PMID: 6816100.
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    100. Murphey RM, Duarte FA, Novaes WC, Penedo MC. Age group differences in bovine investigatory behavior. Dev Psychobiol. 1981 Mar; 14(2):117-25. PMID: 7202849.
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