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Bart C Weimer, PhD; BS

Title(s)Professor, School of Veterinary Medicine
SchoolUniversity of California, Davis
Address4023 VM3B
CA 95616
Phone530-754-0109
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Assessment of gaseous ozone treatment on Salmonella Typhimurium and Escherichia coli O157:H7 reductions in poultry litter. Waste Manag. 2020 Aug 14; 117:42-47. Chang R, Pandey P, Li Y, Venkitasamy C, Chen Z, Gallardo R, Weimer B, Jay-Russell M, Weimer B. PMID: 32805600.
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    2. Improving Biosecurity Procedures to Minimize the Risk of Spreading Pathogenic Infections Agents After Carcass Recycling. Front Microbiol. 2020; 11:623. Pandey P, Vidyarthi SK, Vaddella V, Venkitasamy C, Pitesky M, Weimer B, Pires AFA. PMID: 32390969.
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    3. Food authentication from shotgun sequencing reads with an application on high protein powders. NPJ Sci Food. 2019; 3:24. Haiminen N, Edlund S, Chambliss D, Kunitomi M, Weimer BC, Ganesan B, Baker R, Markwell P, Davis M, Huang BC, Kong N, Prill RJ, Marlowe CH, Quintanar A, Pierre S, Dubois G, Kaufman JH, Parida L, Beck KL. PMID: 31754632.
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    4. Insular Microbiogeography: Three Pathogens as Exemplars. Curr Issues Mol Biol. 2020; 36:89-108. Kaufman JH, Elkins CA, Davis M, Weis AM, Huang BC, Mammel MK, Patel IR, Beck KL, Edlund S, Chambliss D, Douglas J, Bianco S, Kunitomi M, Weimer BC. PMID: 31596250.
      View in: PubMed   Mentions: 1     Fields:    
    5. Draft Genome Sequence of Bacillus velezensis CE2, Which Genetically Encodes a Novel Multicomponent Lantibiotic. Microbiol Resour Announc. 2019 Jan; 8(3). Campbell E, Gerst M, Huang BC, Kong N, Weimer BC, Yousef AE. PMID: 30687828.
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    6. Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota. PLoS Biol. 2018 08; 16(8):e2006352. Van Deynze A, Zamora P, Delaux PM, Heitmann C, Jayaraman D, Rajasekar S, Graham D, Maeda J, Gibson D, Schwartz KD, Berry AM, Bhatnagar S, Jospin G, Darling A, Jeannotte R, Lopez J, Weimer BC, Eisen JA, Shapiro HY, Ané JM, Bennett AB. PMID: 30086128.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCellsPHPublic Health
    7. Whole Cell Cross-Linking to Discover Host-Microbe Protein Cognate Receptor/Ligand Pairs. Front Microbiol. 2018; 9:1585. Weimer BC, Chen P, Desai PT, Chen D, Shah J. PMID: 30072965.
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    8. Exploiting Functional Context in Biology: Reconsidering Classification of Bacterial Life. . 2018 Apr 1; 17-20. James H. Kaufman, Ed Seabolt, Mark Kunitomi, Akshay Agarwal, Kristen Beck, Harsha Krishnareddy, Bart C. Weimer. .
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    9. Comparative analysis of Campylobacter isolates from wild birds and chickens using MALDI-TOF MS, biochemical testing, and DNA sequencing. J Vet Diagn Invest. 2018 May; 30(3):354-361. Lawton SJ, Weis AM, Byrne BA, Fritz H, Taff CC, Townsend AK, Weimer BC, Mete A, Wheeler S, Boyce WM. PMID: 29528812.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    10. Effect of temperature control on the metabolite content in exhaled breath condensate. Anal Chim Acta. 2018 May 02; 1006:49-60. Zamuruyev KO, Borras E, Pettit DR, Aksenov AA, Simmons JD, Weimer BC, Schivo M, Kenyon NJ, Delplanque JP, Davis CE. PMID: 30016264.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    11. Prebiotic Oligosaccharides Potentiate Host Protective Responses against L. Monocytogenes Infection. Pathogens. 2017 Dec 19; 6(4). Chen P, Reiter T, Huang B, Kong N, Weimer BC. PMID: 29257110.
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    12. Exhaled breath condensate methods adapted from human studies using longitudinal metabolomics for predicting early health alterations in dolphins. Anal Bioanal Chem. 2017 Nov; 409(28):6523-6536. Borras E, Aksenov AA, Baird M, Novick B, Schivo M, Zamuruyev KO, Pasamontes A, Parry C, Foutouhi S, Venn-Watson S, Weimer BC, Davis CE. PMID: 29063162.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimals
    13. Draft Genome Sequences of Salmonella enterica Serovar Typhimurium LT2 with Deleted Chitinases That Are Emerging Virulence Factors. Genome Announc. 2017 Aug 03; 5(31). Arabyan N, Huang BC, Weimer BC. PMID: 28774970.
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    14. Draft Genome Sequences of 1,183 Salmonella Strains from the 100K Pathogen Genome Project. Genome Announc. 2017 Jul 13; 5(28). Kong N, Davis M, Arabyan N, Huang BC, Weis AM, Chen P, Thao K, Ng W, Chin N, Foutouhi S, Foutouhi A, Kaufman J, Xie Y, Storey DB, Weimer BC. PMID: 28705963.
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    15. 100K Pathogen Genome Project. Genome Announc. 2017 Jul 13; 5(28). Weimer BC. PMID: 28705971.
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    16. SigTree: A Microbial Community Analysis Tool to Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree. Comput Struct Biotechnol J. 2017; 15:372-378. Stevens JR, Jones TR, Lefevre M, Ganesan B, Weimer BC. PMID: 28748045.
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    17. Analytical methodologies for broad metabolite coverage of exhaled breath condensate. J Chromatogr B Analyt Technol Biomed Life Sci. 2017 Sep 01; 1061-1062:17-25. Aksenov AA, Zamuruyev KO, Pasamontes A, Brown JF, Schivo M, Foutouhi S, Weimer BC, Kenyon NJ, Davis CE. PMID: 28697414.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    18. Draft Genome Sequences of Salmonella Lysozyme Gene Knockout Mutants. Genome Announc. 2017 Jun 08; 5(23). Arabyan N, Huang BC, Weimer BC. PMID: 28596411.
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    19. A Syst-OMICS Approach to Ensuring Food Safety and Reducing the Economic Burden of Salmonellosis. Front Microbiol. 2017; 8:996. Emond-Rheault JG, Jeukens J, Freschi L, Kukavica-Ibrulj I, Boyle B, Dupont MJ, Colavecchio A, Barrere V, Cadieux B, Arya G, Bekal S, Berry C, Burnett E, Cavestri C, Chapin TK, Crouse A, Daigle F, Danyluk MD, Delaquis P, Dewar K, Doualla-Bell F, Fliss I, Fong K, Fournier E, Franz E, Garduno R, Gill A, Gruenheid S, Harris L, Huang CB, Huang H, Johnson R, Joly Y, Kerhoas M, Kong N, Lapointe G, Larivière L, Loignon S, Malo D, Moineau S, Mottawea W, Mukhopadhyay K, Nadon C, Nash J, Ngueng Feze I, Ogunremi D, Perets A, Pilar AV, Reimer AR, Robertson J, Rohde J, Sanderson KE, Song L, Stephan R, Tamber S, Thomassin P, Tremblay D, Usongo V, Vincent C, Wang S, Weadge JT, Wiedmann M, Wijnands L, Wilson ED, Wittum T, Yoshida C, Youfsi K, Zhu L, Weimer BC, Goodridge L, Levesque RC. PMID: 28626454.
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    20. Amylases and Their Importance during Glycan Degradation: Genome Sequence Release of Salmonella Amylase Knockout Strains. Genome Announc. 2017 May 18; 5(20). Arabyan N, Huang BC, Weimer BC. PMID: 28522713.
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    21. Implication of Sialidases in Salmonella Infection: Genome Release of Sialidase Knockout Strains from Salmonella enterica Serovar Typhimurium LT2. Genome Announc. 2017 May 11; 5(19). Arabyan N, Weis AM, Huang BC, Weimer BC. PMID: 28495784.
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    22. Shigella Draft Genome Sequences: Resources for Food Safety and Public Health. Genome Announc. 2017 Apr 20; 5(16). Weis AM, Gilpin B, Huang BC, Kong N, Chen P, Weimer BC. PMID: 28428292.
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    23. Draft Genome Sequence of Multidrug-Resistant Abortive Campylobacter jejuni from Northern California. Genome Announc. 2017 Apr 13; 5(15). Weis AM, Clothier KA, Huang BC, Kong N, Weimer BC. PMID: 28408683.
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    24. Automation of PacBio SMRTbell NGS library preparation for bacterial genome sequencing. Stand Genomic Sci. 2017; 12:27. Kong N, Ng W, Thao K, Agulto R, Weis A, Kim KS, Korlach J, Hickey L, Kelly L, Lappin S, Weimer BC. PMID: 28344744.
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    25. Fallacy of the Unique Genome: Sequence Diversity within Single Helicobacter pylori Strains. mBio. 2017 02 21; 8(1). Draper JL, Hansen LM, Bernick DL, Abedrabbo S, Underwood JG, Kong N, Huang BC, Weis AM, Weimer BC, van Vliet AH, Pourmand N, Solnick JV, Karplus K, Ottemann KM. PMID: 28223462.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    26. 100K Pathogen Genome Project: 306 Listeria Draft Genome Sequences for Food Safety and Public Health. Genome Announc. 2017 Feb 09; 5(6). Chen P, Kong N, Huang B, Thao K, Ng W, Storey DB, Arabyan N, Foutouhi A, Foutouhi S, Weimer BC. PMID: 28183778.
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    27. Comparative Genomics Reveals the Diversity of Restriction-Modification Systems and DNA Methylation Sites in Listeria monocytogenes. Appl Environ Microbiol. 2017 02 01; 83(3). Chen P, den Bakker HC, Korlach J, Kong N, Storey DB, Paxinos EE, Ashby M, Clark T, Luong K, Wiedmann M, Weimer BC. PMID: 27836852.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    28. Large-Scale Release of Campylobacter Draft Genomes: Resources for Food Safety and Public Health from the 100K Pathogen Genome Project. Genome Announc. 2017 Jan 05; 5(1). Weis AM, Huang BC, Storey DB, Kong N, Chen P, Arabyan N, Gilpin B, Mason C, Townsend AK, Smith WA, Byrne BA, Taff CC, Weimer BC. PMID: 28057746.
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    29. Chapter 19 Amino Acid Catabolism and Its Relationship to Cheese Flavor Outcomes. . 2017 Jan 1; 483-516. Balasubramanian Ganesan, Bart C. Weimer. .
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    30. Human breath metabolomics using an optimized non-invasive exhaled breath condensate sampler. J Breath Res. 2016 12 22; 11(1):016001. Zamuruyev KO, Aksenov AA, Pasamontes A, Brown JF, Pettit DR, Foutouhi S, Weimer BC, Schivo M, Kenyon NJ, Delplanque JP, Davis CE. PMID: 28004639.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    31. Draft Genome Sequences of Campylobacter jejuni Strains That Cause Abortion in Livestock. Genome Announc. 2016 Dec 01; 4(6). Weis AM, Clothier KA, Huang BC, Kong N, Weimer BC. PMID: 27908990.
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    32. Genomic Comparison of Campylobacter spp. and Their Potential for Zoonotic Transmission between Birds, Primates, and Livestock. Appl Environ Microbiol. 2016 12 15; 82(24):7165-7175. Weis AM, Storey DB, Taff CC, Townsend AK, Huang BC, Kong NT, Clothier KA, Spinner A, Byrne BA, Weimer BC. PMID: 27736787.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansAnimalsCells
    33. The Bacterial Mobile Resistome Transfer Network Connecting the Animal and Human Microbiomes. Appl Environ Microbiol. 2016 11 15; 82(22):6672-6681. Hu Y, Yang X, Li J, Lv N, Liu F, Wu J, Lin IY, Wu N, Weimer BC, Gao GF, Liu Y, Zhu B. PMID: 27613679.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    34. Salmonella Typhimurium Enzymatically Landscapes the Host Intestinal Epithelial Cell (IEC) Surface Glycome to Increase Invasion. Mol Cell Proteomics. 2016 Dec; 15(12):3653-3664. Park D, Arabyan N, Williams CC, Song T, Mitra A, Weimer BC, Maverakis E, Lebrilla CB. PMID: 27754876.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    35. Enhanced non-invasive respiratory sampling from bottlenose dolphins for breath metabolomics measurements. J Breath Res. 2016 09 30; 10(4):046005. Zamuruyev KO, Aksenov AA, Baird M, Pasamontes A, Parry C, Foutouhi S, Venn-Watson S, Weimer BC, Delplanque JP, Davis CE. PMID: 27689905.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimals
    36. Influence of Host Ecology and Behavior on Campylobacter jejuni Prevalence and Environmental Contamination Risk in a Synanthropic Wild Bird Species. Appl Environ Microbiol. 2016 08 01; 82(15):4811-20. Taff CC, Weis AM, Wheeler S, Hinton MG, Weimer BC, Barker CM, Jones M, Logsdon R, Smith WA, Boyce WM, Townsend AK. PMID: 27260356.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    37. Salmonella Degrades the Host Glycocalyx Leading to Altered Infection and Glycan Remodeling. Sci Rep. 2016 07 08; 6:29525. Arabyan N, Park D, Foutouhi S, Weis AM, Huang BC, Williams CC, Desai P, Shah J, Jeannotte R, Kong N, Lebrilla CB, Weimer BC. PMID: 27389966.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    38. Complete Genome Sequences of a Clinical Isolate and an Environmental Isolate of Vibrio parahaemolyticus. Genome Announc. 2015 Mar 26; 3(2). Lüdeke CH, Kong N, Weimer BC, Fischer M, Jones JL. PMID: 25814612.
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    39. Metabolome searcher: a high throughput tool for metabolite identification and metabolic pathway mapping directly from mass spectrometry and using genome restriction. BMC Bioinformatics. 2015 Feb 25; 16:62. Dhanasekaran AR, Pearson JL, Ganesan B, Weimer BC. PMID: 25887958.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    40. Enhanced cardiac Akt/protein kinase B signaling contributes to pathological cardiac hypertrophy in part by impairing mitochondrial function via transcriptional repression of mitochondrion-targeted nuclear genes. Mol Cell Biol. 2015 Mar; 35(5):831-46. Wende AR, O'Neill BT, Bugger H, Riehle C, Tuinei J, Buchanan J, Tsushima K, Wang L, Caro P, Guo A, Sloan C, Kim BJ, Wang X, Pereira RO, McCrory MA, Nye BG, Benavides GA, Darley-Usmar VM, Shioi T, Weimer BC, Abel ED. PMID: 25535334.
      View in: PubMed   Mentions: 21     Fields:    Translation:AnimalsCells
    41. CESA TRAFFICKING INHIBITOR inhibits cellulose deposition and interferes with the trafficking of cellulose synthase complexes and their associated proteins KORRIGAN1 and POM2/CELLULOSE SYNTHASE INTERACTIVE PROTEIN1. Plant Physiol. 2015 Feb; 167(2):381-93. Worden N, Wilkop TE, Esteve VE, Jeannotte R, Lathe R, Vernhettes S, Weimer B, Hicks G, Alonso J, Labavitch J, Persson S, Ehrhardt D, Drakakaki G. PMID: 25535279.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    42. Gut microbiota-produced succinate promotes C. difficile infection after antibiotic treatment or motility disturbance. Cell Host Microbe. 2014 Dec 10; 16(6):770-7. Ferreyra JA, Wu KJ, Hryckowian AJ, Bouley DM, Weimer BC, Sonnenburg JL. PMID: 25498344.
      View in: PubMed   Mentions: 75     Fields:    Translation:HumansAnimalsCells
    43. Genetic mechanisms underlying the pathogenicity of cold-stressed Salmonella enterica serovar typhimurium in cultured intestinal epithelial cells. Appl Environ Microbiol. 2014 Nov; 80(22):6943-53. Shah J, Desai PT, Weimer BC. PMID: 25192993.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    44. Genomic epidemiology of Salmonella enterica serotype Enteritidis based on population structure of prevalent lineages. Emerg Infect Dis. 2014 Sep; 20(9):1481-9. Deng X, Desai PT, den Bakker HC, Mikoleit M, Tolar B, Trees E, Hendriksen RS, Frye JG, Porwollik S, Weimer BC, Wiedmann M, Weinstock GM, Fields PI, McClelland M. PMID: 25147968.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCellsPHPublic Health
    45. Gastrointestinal microbes interact with canine adipose-derived mesenchymal stem cells in vitro and enhance immunomodulatory functions. Stem Cells Dev. 2014 Aug 15; 23(16):1831-43. Kol A, Foutouhi S, Walker NJ, Kong NT, Weimer BC, Borjesson DL. PMID: 24803072.
      View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
    46. Exploring bacterial epigenomics in the next-generation sequencing era: a new approach for an emerging frontier. Trends Microbiol. 2014 May; 22(5):292-300. Chen P, Jeannotte R, Weimer BC. PMID: 24725482.
      View in: PubMed   Mentions: 7     Fields:    Translation:Cells
    47. Probiotic bacteria survive in Cheddar cheese and modify populations of other lactic acid bacteria. J Appl Microbiol. 2014 Jun; 116(6):1642-56. Ganesan B, Weimer BC, Pinzon J, Dao Kong N, Rompato G, Brothersen C, McMahon DJ. PMID: 24905221.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    48. The Family Brevibacteriaceae. . 2014 Jan 1; 141-153. Marie-Pierre Forquin-Gomez, Bart C. Weimer, Louis Sorieul, Jörn Kalinowski, Tatiana Vallaeys. .
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    49. Molecular cloning and expression levels of the monoterpene synthase gene (ZMM1) in Cassumunar ginger (Zingiber montanum (Koenig) Link ex Dietr.). Archives of Biological Sciences. 2014 Jan 1; 66(4):1321-1331. Saowaluck Bua-In, Yingyong Paisooksantivatana, Bart C. Weimer, Srimek Chowpongpang. .
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    50. Cross-talk between E. coli strains and a human colorectal adenocarcinoma-derived cell line. Sci Rep. 2013 Dec 04; 3:3416. He X, Mishchuk DO, Shah J, Weimer BC, Slupsky CM. PMID: 24301462.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    51. Insulin receptor substrate signaling suppresses neonatal autophagy in the heart. J Clin Invest. 2013 Dec; 123(12):5319-33. Riehle C, Wende AR, Sena S, Pires KM, Pereira RO, Zhu Y, Bugger H, Frank D, Bevins J, Chen D, Perry CN, Dong XC, Valdez S, Rech M, Sheng X, Weimer BC, Gottlieb RA, White MF, Abel ED. PMID: 24177427.
      View in: PubMed   Mentions: 36     Fields:    Translation:AnimalsCells
    52. Preadaptation to cold stress in Salmonella enterica serovar Typhimurium increases survival during subsequent acid stress exposure. Appl Environ Microbiol. 2013 Dec; 79(23):7281-9. Shah J, Desai PT, Chen D, Stevens JR, Weimer BC. PMID: 24056458.
      View in: PubMed   Mentions: 14     Fields:    Translation:Cells
    53. Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens. Nature. 2013 Oct 03; 502(7469):96-9. Ng KM, Ferreyra JA, Higginbottom SK, Lynch JB, Kashyap PC, Gopinath S, Naidu N, Choudhury B, Weimer BC, Monack DM, Sonnenburg JL. PMID: 23995682.
      View in: PubMed   Mentions: 276     Fields:    Translation:AnimalsCells
    54. Dissecting the role of milk components on gut microbiota composition. Gut Microbes. 2013 Mar-Apr; 4(2):136-9. Maga EA, Weimer BC, Murray JD. PMID: 23235404.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansAnimals
    55. Consumption of lysozyme-rich milk can alter microbial fecal populations. Appl Environ Microbiol. 2012 Sep; 78(17):6153-60. Maga EA, Desai PT, Weimer BC, Dao N, Kültz D, Murray JD. PMID: 22752159.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansAnimalsCells
    56. Intraspecies variation in the emergence of hyperinfectious bacterial strains in nature. PLoS Pathog. 2012; 8(4):e1002647. Heithoff DM, Shimp WR, House JK, Xie Y, Weimer BC, Sinsheimer RL, Mahan MJ. PMID: 22511871.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansAnimalsCells
    57. Genetic loss of insulin receptors worsens cardiac efficiency in diabetes. J Mol Cell Cardiol. 2012 May; 52(5):1019-26. Bugger H, Riehle C, Jaishy B, Wende AR, Tuinei J, Chen D, Soto J, Pires KM, Boudina S, Theobald HA, Luptak I, Wayment B, Wang X, Litwin SE, Weimer BC, Abel ED. PMID: 22342406.
      View in: PubMed   Mentions: 22     Fields:    Translation:AnimalsCells
    58. Glycosylation of human milk lactoferrin exhibits dynamic changes during early lactation enhancing its role in pathogenic bacteria-host interactions. Mol Cell Proteomics. 2012 Jun; 11(6):M111.015248. Barboza M, Pinzon J, Wickramasinghe S, Froehlich JW, Moeller I, Smilowitz JT, Ruhaak LR, Huang J, Lönnerdal B, German JB, Medrano JF, Weimer BC, Lebrilla CB. PMID: 22261723.
      View in: PubMed   Mentions: 38     Fields:    Translation:HumansCells
    59. Bacteroides in the infant gut consume milk oligosaccharides via mucus-utilization pathways. Cell Host Microbe. 2011 Nov 17; 10(5):507-14. Marcobal A, Barboza M, Sonnenburg ED, Pudlo N, Martens EC, Desai P, Lebrilla CB, Weimer BC, Mills DA, German JB, Sonnenburg JL. PMID: 22036470.
      View in: PubMed   Mentions: 118     Fields:    Translation:HumansAnimalsCells
    60. Mycoepoxydiene, a fungal polyketide, induces cell cycle arrest at the G2/M phase and apoptosis in HeLa cells. Bioorg Med Chem Lett. 2010 Dec 01; 20(23):7054-8. Wang J, Zhao B, Zhang W, Wu X, Wang R, Huang Y, Chen D, Park K, Weimer BC, Shen Y. PMID: 20970330.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    61. Functional biogeography as evidence of gene transfer in hypersaline microbial communities. PLoS One. 2010 Sep 23; 5(9):e12919. Parnell JJ, Rompato G, Latta LC, Pfrender ME, Van Nostrand JD, He Z, Zhou J, Andersen G, Champine P, Ganesan B, Weimer BC. PMID: 20957119.
      View in: PubMed   Mentions: 12     Fields:    Translation:CellsPHPublic Health
    62. Broad conservation of milk utilization genes in Bifidobacterium longum subsp. infantis as revealed by comparative genomic hybridization. Appl Environ Microbiol. 2010 Nov; 76(22):7373-81. LoCascio RG, Desai P, Sela DA, Weimer B, Mills DA. PMID: 20802066.
      View in: PubMed   Mentions: 60     Fields:    Translation:HumansCells
    63. Development of larval Schistosoma japonicum blocked in Oncomelania hupensis by pre-infection with larval Exorchis sp. J Parasitol. 2009 Dec; 95(6):1321-5. Tang CT, Lu MK, Guo Y, Wang YN, Peng JY, Wu WB, Li WH, Weimer BC, Chen D. PMID: 19663532.
      View in: PubMed   Mentions: 4     Fields:    Translation:Animals
    64. Proteomic remodelling of mitochondrial oxidative pathways in pressure overload-induced heart failure. Cardiovasc Res. 2010 Jan 15; 85(2):376-84. Bugger H, Schwarzer M, Chen D, Schrepper A, Amorim PA, Schoepe M, Nguyen TD, Mohr FW, Khalimonchuk O, Weimer BC, Doenst T. PMID: 19843514.
      View in: PubMed   Mentions: 63     Fields:    Translation:AnimalsCells
    65. Tissue-specific remodeling of the mitochondrial proteome in type 1 diabetic akita mice. Diabetes. 2009 Sep; 58(9):1986-97. Bugger H, Chen D, Riehle C, Soto J, Theobald HA, Hu XX, Ganesan B, Weimer BC, Abel ED. PMID: 19542201.
      View in: PubMed   Mentions: 67     Fields:    Translation:AnimalsCells
    66. Biodiversity in microbial communities: system scale patterns and mechanisms. Mol Ecol. 2009 Apr; 18(7):1455-62. Parnell JJ, Crowl TA, Weimer BC, Pfrender ME. PMID: 19298265.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
    67. Contribution of impaired myocardial insulin signaling to mitochondrial dysfunction and oxidative stress in the heart. Circulation. 2009 Mar 10; 119(9):1272-83. Boudina S, Bugger H, Sena S, O'Neill BT, Zaha VG, Ilkun O, Wright JJ, Mazumder PK, Palfreyman E, Tidwell TJ, Theobald H, Khalimonchuk O, Wayment B, Sheng X, Rodnick KJ, Centini R, Chen D, Litwin SE, Weimer BE, Abel ED. PMID: 19237663.
      View in: PubMed   Mentions: 102     Fields:    Translation:AnimalsCells
    68. Cytosporone B is an agonist for nuclear orphan receptor Nur77. Nat Chem Biol. 2008 Sep; 4(9):548-56. Zhan Y, Du X, Chen H, Liu J, Zhao B, Huang D, Li G, Xu Q, Zhang M, Weimer BC, Chen D, Cheng Z, Zhang L, Li Q, Li S, Zheng Z, Song S, Huang Y, Ye Z, Su W, Lin SC, Shen Y, Wu Q. PMID: 18690216.
      View in: PubMed   Mentions: 86     Fields:    Translation:HumansAnimalsCells
    69. Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth. BMC Genomics. 2008 May 27; 9:247. Lee JH, Karamychev VN, Kozyavkin SA, Mills D, Pavlov AR, Pavlova NV, Polouchine NN, Richardson PM, Shakhova VV, Slesarev AI, Weimer B, O'Sullivan DJ. PMID: 18505588.
      View in: PubMed   Mentions: 64     Fields:    Translation:HumansCells
    70. A novel approach to identify bovine sperm membrane proteins that interact with receptors on the vitelline membrane of bovine oocytes. Mol Reprod Dev. 2008 Apr; 75(4):641-9. Pate BJ, White KL, Chen D, Aston KI, Sessions BR, Bunch TD, Weimer BC. PMID: 17886263.
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    71. Biotechnology of Flavor Production in Dairy Products. . 2008 Feb 28; 56-82. Bart C. Weimer, Sweta Rajan, Balasubramanian Ganesan. .
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    72. Solid-phase capture of pathogenic bacteria by using gangliosides and detection with real-time PCR. Appl Environ Microbiol. 2008 Apr; 74(7):2254-8. Desai PT, Walsh MK, Weimer BC. PMID: 18263751.
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    73. Microarray analysis reveals potential mechanisms of BRMS1-mediated metastasis suppression. Clin Exp Metastasis. 2007; 24(7):551-65. Champine PJ, Michaelson J, Weimer BC, Welch DR, DeWald DB. PMID: 17896182.
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    74. Specific integrin subunits in bovine oocytes, including novel sequences for alpha 6 and beta 3 subunits. Mol Reprod Dev. 2007 May; 74(5):600-7. Pate BJ, White KL, Winger QA, Rickords LF, Aston KI, Sessons BR, Li GP, Campbell KD, Weimer B, Bunch TD. PMID: 17039534.
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    75. Carbohydrate starvation causes a metabolically active but nonculturable state in Lactococcus lactis. Appl Environ Microbiol. 2007 Apr; 73(8):2498-512. Ganesan B, Stuart MR, Weimer BC. PMID: 17293521.
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    76. Study of biochemical pathways and enzymes involved in pyrene degradation by Mycobacterium sp. strain KMS. Appl Environ Microbiol. 2006 Dec; 72(12):7821-8. Liang Y, Gardner DR, Miller CD, Chen D, Anderson AJ, Weimer BC, Sims RC. PMID: 17041157.
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    77. Comparative genomics of the lactic acid bacteria. Proc Natl Acad Sci U S A. 2006 Oct 17; 103(42):15611-6. Makarova K, Slesarev A, Wolf Y, Sorokin A, Mirkin B, Koonin E, Pavlov A, Pavlova N, Karamychev V, Polouchine N, Shakhova V, Grigoriev I, Lou Y, Rohksar D, Lucas S, Huang K, Goodstein DM, Hawkins T, Plengvidhya V, Welker D, Hughes J, Goh Y, Benson A, Baldwin K, Lee JH, Díaz-Muñiz I, Dosti B, Smeianov V, Wechter W, Barabote R, Lorca G, Altermann E, Barrangou R, Ganesan B, Xie Y, Rawsthorne H, Tamir D, Parker C, Breidt F, Broadbent J, Hutkins R, O'Sullivan D, Steele J, Unlu G, Saier M, Klaenhammer T, Richardson P, Kozyavkin S, Weimer B, Mills D. PMID: 17030793.
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    78. Identification of the leucine-to-2-methylbutyric acid catabolic pathway of Lactococcus lactis. Appl Environ Microbiol. 2006 Jun; 72(6):4264-73. Ganesan B, Dobrowolski P, Weimer BC. PMID: 16751541.
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    79. Fatty acid production from amino acids and alpha-keto acids by Brevibacterium linens BL2. Appl Environ Microbiol. 2004 Nov; 70(11):6385-93. Ganesan B, Seefeldt K, Weimer BC. PMID: 15528496.
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    80. DNA Macroarray profiling of Lactococcus lactis subsp. lactis IL1403 gene expression during environmental stresses. Appl Environ Microbiol. 2004 Nov; 70(11):6738-47. Xie Y, Chou LS, Cutler A, Weimer B. PMID: 15528540.
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    81. Monocarboxylic acid production by lactococci and lactobacilli. International Dairy Journal. 2004 Mar 1; 14(3):237-246. Balasubramanian Ganesan, Kimberly Seefeldt, Ramarathna C. Koka, Benjamin Dias, Bart C. Weimer. .
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    82. Role of aminotransferase IlvE in production of branched-chain fatty acids by Lactococcus lactis subsp. lactis. Appl Environ Microbiol. 2004 Jan; 70(1):638-41. Ganesan B, Weimer BC. PMID: 14711703.
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    83. Discovering lactic acid bacteria by genomics. Antonie Van Leeuwenhoek. 2002 Aug; 82(1-4):29-58. Klaenhammer T, Altermann E, Arigoni F, Bolotin A, Breidt F, Broadbent J, Cano R, Chaillou S, Deutscher J, Gasson M, van de Guchte M, Guzzo J, Hartke A, Hawkins T, Hols P, Hutkins R, Kleerebezem M, Kok J, Kuipers O, Lubbers M, Maguin E, McKay L, Mills D, Nauta A, Overbeek R, Pel H, Pridmore D, Saier M, van Sinderen D, Sorokin A, Steele J, O'Sullivan D, de Vos W, Weimer B, Zagorec M, Siezen R. PMID: 12369195.
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    84. Use of capillary electrophoresis and laser-induced fluorescence for attomole detection of amino acids. J Chromatogr A. 2002 Jul 26; 964(1-2):243-53. Ummadi M, Weimer BC. PMID: 12198853.
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    85. Tryptophan catabolism in Brevibacterium linens as a potential cheese flavor adjunct. J Dairy Sci. 2001 Aug; 84(8):1773-82. Ummadi M, Weimer BC. PMID: 11518299.
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    86. Relationship of arginine and lactose utilization by Lactococcus lactis ssp. lactis ML3. International Dairy Journal. 2001 Jul 1; 11(4-7):253-258. Lan-szu Chou, Bart C. Weimer, Richard Cutler. .
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    87. Solid-phase capture of proteins, spores, and bacteria. Appl Environ Microbiol. 2001 Mar; 67(3):1300-7. Weimer BC, Walsh MK, Beer C, Koka R, Wang X. PMID: 11229925.
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    88. Optimizing the immobilization of single-stranded DNA onto glass beads. J Biochem Biophys Methods. 2001 Feb 26; 47(3):221-31. Walsh MK, Wang X, Weimer BC. PMID: 11245893.
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    89. Influence of growth conditions on heat-stable phospholipase activity in Pseudomonas. J Dairy Res. 2001 Feb; 68(1):109-16. Koka RA, Weimer BC. PMID: 11289260.
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    90. Diversity of sulfur compound production in lactic acid bacteria. J Dairy Sci. 2000 Dec; 83(12):2740-6. Seefeldt KE, Weimer BC. PMID: 11132840.
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    91. Influence of a poly-ethylene glycol spacer on antigen capture by immobilized antibodies. J Biochem Biophys Methods. 2000 Sep 11; 45(2):211-9. Weimer BC, Walsh MK, Wang X. PMID: 10989137.
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    92. Isolation and characterization of a protease from Pseudomonas fluorescens RO98. J Appl Microbiol. 2000 Aug; 89(2):280-8. Koka R, Weimer BC. PMID: 10971760.
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    93. Investigation of the ability of a purified protease from Pseudomonas fluorescens RO98 to hydrolyze bitter peptides from cheese. International Dairy Journal. 2000 Jan 1; 10(1-2):75-79. Ramarathna Koka, Bart C Weimer. .
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    94. Genetic characterization of a cell envelope-associated proteinase from Lactobacillus helveticus CNRZ32. J Bacteriol. 1999 Aug; 181(15):4592-7. Pederson JA, Mileski GJ, Weimer BC, Steele JL. PMID: 10419958.
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    95. Sulfur metabolism in bacteria associated with cheese. Antonie Van Leeuwenhoek. 1999 Jul-Nov; 76(1-4):247-61. Weimer B, Seefeldt K, Dias B. PMID: 10532382.
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    96. Influence of carbohydrate starvation and arginine on culturability and amino acid utilization of lactococcus lactis subsp. lactis. Appl Environ Microbiol. 1999 Feb; 65(2):665-73. Stuart MR, Chou LS, Weimer BC. PMID: 9925598.
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    97. Isolation and characterization of acid- and bile-tolerant isolates from strains of Lactobacillus acidophilus. J Dairy Sci. 1999 Jan; 82(1):23-31. Chou LS, Weimer B. PMID: 10022003.
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    98. Immunomagnetic detection of Bacillus stearothermophilus spores in food and environmental samples. Appl Environ Microbiol. 1997 May; 63(5):1643-6. Blake MR, Weimer BC. PMID: 9143097.
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    99. Proteolytic Characterization of Lactobacillus delbrueckii ssp. bulgaricus Strains by the o-Phthaldialdehyde Test and Amino Acid Analysis1. Journal of Dairy Science. 1991 Feb 1; 74(2):398-403. Craig J. Oberg, Bart C. Weimer, Lynn V. Moyes, Rodney J. Brown, Gary H. Richardson. .
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