Andreas J Baumler

Title(s)Professor, MED: Medical Microbiology & Imm
SchoolSchool of Medicine
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    1. The coming microbial crisis: Our antibiotic bubble is about to burst. Science. 2024 Sep 20; 385(6715):eads3473. Bäumler AJ. PMID: 39298606.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    2. Epithelial hypoxia maintains colonization resistance against Candida albicans. Cell Host Microbe. 2024 Jul 10; 32(7):1103-1113.e6. Savage HP, Bays DJ, Tiffany CR, Gonzalez MAF, Bejarano EJ, Carvalho TP, Luo Z, Masson HLP, Nguyen H, Santos RL, Reagan KL, Thompson GR, Bäumler AJ. PMID: 38838675; PMCID: PMC11239274.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    3. Enhanced mucosal mitochondrial function corrects dysbiosis and OXPHOS metabolism in IBD. bioRxiv. 2024 Mar 14. Kapur N, Alam MA, Hassan SA, Patel PH, Wempe LA, Bhogoju S, Goretsky T, Kim JH, Herzog J, Ge Y, Awuah SG, Byndloss M, Baumler AJ, Zadeh MM, Sartor RB, Barrett T. PMID: 38559035; PMCID: PMC10979996.
      View in: PubMed   Mentions:
    4. High fat intake sustains sorbitol intolerance after antibiotic-mediated Clostridia depletion from the gut microbiota. Cell. 2024 Feb 29; 187(5):1191-1205.e15. Lee JY, Tiffany CR, Mahan SP, Kellom M, Rogers AWL, Nguyen H, Stevens ET, Masson HLP, Yamazaki K, Marco ML, Eloe-Fadrosh EA, Turnbaugh PJ, Bäumler AJ. PMID: 38366592; PMCID: PMC11023689.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    5. No room at the table. Science. 2023 12 15; 382(6676):1244-1245. Radlinski LC, Bäumler AJ. PMID: 38096288.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
    6. Gut dysbiosis: Ecological causes and causative effects on human disease. Proc Natl Acad Sci U S A. 2023 Dec 12; 120(50):e2316579120. Winter SE, Bäumler AJ. PMID: 38048456; PMCID: PMC10722970.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    7. Vi polysaccharide and conjugated vaccines afford similar early, IgM or IgG-independent control of infection but boosting with conjugated Vi vaccines sustains the efficacy of immune responses. Front Immunol. 2023; 14:1139329. Jossi SE, Arcuri M, Alshayea A, Persaud RR, Marcial-Juárez E, Palmieri E, Di Benedetto R, Pérez-Toledo M, Pillaye J, Channell WM, Schager AE, Lamerton RE, Cook CN, Goodall M, Haneda T, Bäumler AJ, Jackson-Jones LH, Toellner KM, MacLennan CA, Henderson IR, Micoli F, Cunningham AF. PMID: 37033932; PMCID: PMC10076549.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    8. Predicting the Next Superspreader. mSystems. 2023 02 23; 8(1):e0119922. Chavez-Arroyo A, Bäumler AJ. PMID: 36815796; PMCID: PMC9948712.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    9. Identification of collaborative cross mouse strains permissive to Salmonella enterica serovar Typhi infection. Sci Rep. 2023 01 09; 13(1):393. Alugupalli KR, Kothari S, Cravens MP, Walker JA, Dougharty DT, Dickinson GS, Gatto LA, Bäumler AJ, Wangdi T, Miller DR, Pardo-Manuel de Villena F, Siracusa LD. PMID: 36624251; PMCID: PMC9829673.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    10. Bile acids as modulators of gut microbiota composition and function. Gut Microbes. 2023 Jan-Dec; 15(1):2172671. Larabi AB, Masson HLP, Bäumler AJ. PMID: 36740850; PMCID: PMC9904317.
      View in: PubMed   Mentions: 48     Fields:    Translation:Humans
    11. The IRE1α-XBP1 Signaling Axis Promotes Glycolytic Reprogramming in Response to Inflammatory Stimuli. mBio. 2023 02 28; 14(1):e0306822. English BC, Savage HP, Mahan SP, Diaz-Ochoa VE, Young BM, Abuaita BH, Sule G, Knight JS, O'Riordan MX, Bäumler AJ, Tsolis RM. PMID: 36475773; PMCID: PMC9973330.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    12. The Lack of Natural IgM Increases Susceptibility and Impairs Anti-Vi Polysaccharide IgG Responses in a Mouse Model of Typhoid. Immunohorizons. 2022 12 01; 6(12):807-816. Alugupalli AS, Cravens MP, Walker JA, Gulandijany D, Dickinson GS, Debes GF, Schifferli DM, Bäumler AJ, Alugupalli KR. PMID: 36480484; PMCID: PMC10205010.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimals
    13. The Vi Capsular Polysaccharide of Salmonella Typhi Promotes Macrophage Phagocytosis by Binding the Human C-Type Lectin DC-SIGN. mBio. 2022 12 20; 13(6):e0273322. Zhang LF, Lepenies B, Nakamae S, Young BM, Santos RL, Raffatellu M, Cobb BA, Hiyoshi H, Bäumler AJ. PMID: 36286551; PMCID: PMC9765441.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    14. The microbiome and gut homeostasis. Science. 2022 07; 377(6601):eabp9960. Lee JY, Tsolis RM, Bäumler AJ. PMID: 35771903.
      View in: PubMed   Mentions: 113     Fields:    Translation:HumansCells
    15. To breathe or not to breathe? Elife. 2022 05 20; 11. Radlinski LC, Bäumler AJ. PMID: 35593698; PMCID: PMC9122492.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    16. Host cells subdivide nutrient niches into discrete biogeographical microhabitats for gut microbes. Cell Host Microbe. 2022 06 08; 30(6):836-847.e6. Liou MJ, Miller BM, Litvak Y, Nguyen H, Natwick DE, Savage HP, Rixon JA, Mahan SP, Hiyoshi H, Rogers AWL, Velazquez EM, Butler BP, Collins SR, McSorley SJ, Harshey RM, Byndloss MX, Simon SI, Bäumler AJ. PMID: 35568027; PMCID: PMC9187619.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    17. Assessment of Murine Colon Inflammation Using Intraluminal Fluorescence Lifetime Imaging. Molecules. 2022 Feb 15; 27(4). Alfonso-Garcia A, Cevallos SA, Lee JY, Li C, Bec J, Bäumler AJ, Marcu L. PMID: 35209104; PMCID: PMC8875403.
      View in: PubMed   Mentions: 2     Fields:    Translation:Animals
    18. Virulence factors perforate the pathogen-containing vacuole to signal efferocytosis. Cell Host Microbe. 2022 02 09; 30(2):163-170.e6. Hiyoshi H, English BC, Diaz-Ochoa VE, Wangdi T, Zhang LF, Sakaguchi M, Haneda T, Tsolis RM, Bäumler AJ. PMID: 34951948; PMCID: PMC8831471.
      View in: PubMed   Mentions: 10     Fields:    Translation:Cells
    19. Identification of a gut microbiota member that ameliorates DSS-induced colitis in intestinal barrier enhanced Dusp6-deficient mice. Cell Rep. 2021 11 23; 37(8):110016. Chang CS, Liao YC, Huang CT, Lin CM, Cheung CHY, Ruan JW, Yu WH, Tsai YT, Lin IJ, Huang CH, Liou JS, Chou YH, Chien HJ, Chuang HL, Juan HF, Huang HC, Chan HL, Liao YC, Tang SC, Su YW, Tan TH, Bäumler AJ, Kao CY. PMID: 34818535.
      View in: PubMed   Mentions: 32     Fields:    Translation:HumansAnimalsCells
    20. The longitudinal and cross-sectional heterogeneity of the intestinal microbiota. Curr Opin Microbiol. 2021 10; 63:221-230. Miller BM, Liou MJ, Lee JY, Bäumler AJ. PMID: 34428628.
      View in: PubMed   Mentions: 15     Fields:    
    21. The metabolic footprint of Clostridia and Erysipelotrichia reveals their role in depleting sugar alcohols in the cecum. Microbiome. 2021 08 19; 9(1):174. Tiffany CR, Lee JY, Rogers AWL, Olsan EE, Morales P, Faber F, Bäumler AJ. PMID: 34412707; PMCID: PMC8375055.
      View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
    22. Special Collection on the Microbiome and Infection. Infect Immun. 2021 08 16; 89(9):e0035621. Raffatellu M, Bäumler AJ. PMID: 34280036; PMCID: PMC8370675.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimals
    23. High-fat diet-induced colonocyte dysfunction escalates microbiota-derived trimethylamine N-oxide. Science. 2021 08 13; 373(6556):813-818. Yoo W, Zieba JK, Foegeding NJ, Torres TP, Shelton CD, Shealy NG, Byndloss AJ, Cevallos SA, Gertz E, Tiffany CR, Thomas JD, Litvak Y, Nguyen H, Olsan EE, Bennett BJ, Rathmell JC, Major AS, Bäumler AJ, Byndloss MX. PMID: 34385401; PMCID: PMC8506909.
      View in: PubMed   Mentions: 94     Fields:    Translation:AnimalsCells
    24. The Habitat Filters of Microbiota-Nourishing Immunity. Annu Rev Immunol. 2021 04 26; 39:1-18. Miller BM, Bäumler AJ. PMID: 33902314.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimals
    25. 5-Aminosalicylic Acid Ameliorates Colitis and Checks Dysbiotic Escherichia coli Expansion by Activating PPAR-γ Signaling in the Intestinal Epithelium. mBio. 2021 01 19; 12(1). Cevallos SA, Lee JY, Velazquez EM, Foegeding NJ, Shelton CD, Tiffany CR, Parry BH, Stull-Lane AR, Olsan EE, Savage HP, Nguyen H, Ghanaat SS, Byndloss AJ, Agu IO, Tsolis RM, Byndloss MX, Bäumler AJ. PMID: 33468700; PMCID: PMC7845635.
      View in: PubMed   Mentions: 38     Fields:    Translation:AnimalsCells
    26. Salmonella versus the Microbiome. Microbiol Mol Biol Rev. 2021 02 17; 85(1). Rogers AWL, Tsolis RM, Bäumler AJ. PMID: 33361269; PMCID: PMC8549850.
      View in: PubMed   Mentions: 77     Fields:    Translation:HumansAnimalsCells
    27. Anaerobic Respiration of NOX1-Derived Hydrogen Peroxide Licenses Bacterial Growth at the Colonic Surface. Cell Host Microbe. 2020 12 09; 28(6):789-797.e5. Miller BM, Liou MJ, Zhang LF, Nguyen H, Litvak Y, Schorr EM, Jang KK, Tiffany CR, Butler BP, Bäumler AJ. PMID: 33301718; PMCID: PMC7758056.
      View in: PubMed   Mentions: 22     Fields:    Translation:AnimalsCells
    28. Call for Original Research Papers for a Special Collection in Infection and Immunity: the Microbiome and Infection. Infect Immun. 2020 11 16; 88(12). Raffatellu M, Bäumler AJ. PMID: 32989038; PMCID: PMC7671895.
      View in: PubMed   Mentions:    Fields:    
    29. The ASM Journals Committee Values the Contributions of Black Microbiologists. J Microbiol Biol Educ. 2020; 21(2). Schloss PD, Junior M, Alvania R, Arias CA, Baumler A, Casadevall A, Detweiler C, Drake H, Gilbert J, Imperiale MJ, Lovett S, Maloy S, McAdam AJ, Newton ILG, Sadowsky M, Sandri-Goldin RM, Silhavy TJ, Tontonoz P, Young JH, Cameron CE, Cann I, Fuller AO, Kozik AJ. PMID: 32788948; PMCID: PMC7398665.
      View in: PubMed   Mentions: 2  
    30. High-Fat Diet and Antibiotics Cooperatively Impair Mitochondrial Bioenergetics to Trigger Dysbiosis that Exacerbates Pre-inflammatory Bowel Disease. Cell Host Microbe. 2020 08 12; 28(2):273-284.e6. Lee JY, Cevallos SA, Byndloss MX, Tiffany CR, Olsan EE, Butler BP, Young BM, Rogers AWL, Nguyen H, Kim K, Choi SW, Bae E, Lee JH, Min UG, Lee DC, Bäumler AJ. PMID: 32668218; PMCID: PMC7429289.
      View in: PubMed   Mentions: 64     Fields:    Translation:HumansAnimalsCells
    31. The ASM Journals Committee Values the Contributions of Black Microbiologists. Microbiol Spectr. 2020 07; 8(3). Schloss PD, Junior M, Alvania R, Arias CA, Baumler A, Casadevall A, Detweiler C, Drake H, Gilbert J, Imperiale MJ, Lovett S, Maloy S, McAdam AJ, Newton ILG, Sadowsky M, Sandri-Goldin RM, Silhavy TJ, Tontonoz P, Young JH, Cameron CE, Cann I, Oveta Fuller A, Kozik AJ. PMID: 32737963; PMCID: PMC10773216.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    32. Early-Career Scientists Shaping the New Microbiology. Infect Immun. 2020 06 22; 88(7). Bäumler AJ, Richardson AR, Ottemann KM. PMID: 32179585; PMCID: PMC7309608.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    33. Gastrointestinal host-pathogen interaction in the age of microbiome research. Curr Opin Microbiol. 2020 02; 53:78-89. Tsolis RM, Bäumler AJ. PMID: 32344325.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansAnimalsCells
    34. Factors Required for Adhesion of Salmonella enterica Serovar Typhimurium to Corn Salad (Valerianella locusta). Appl Environ Microbiol. 2020 04 01; 86(8). Elpers L, Kretzschmar J, Nuccio SP, Bäumler AJ, Hensel M. PMID: 32033951; PMCID: PMC7117930.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCellsPHPublic Health
    35. Nod-like receptors are critical for gut-brain axis signalling in mice. J Physiol. 2019 12; 597(24):5777-5797. Pusceddu MM, Barboza M, Keogh CE, Schneider M, Stokes P, Sladek JA, Kim HJD, Torres-Fuentes C, Goldfild LR, Gillis SE, Brust-Mascher I, Rabasa G, Wong KA, Lebrilla C, Byndloss MX, Maisonneuve C, Bäumler AJ, Philpott DJ, Ferrero RL, Barrett KE, Reardon C, Gareau MG. PMID: 31652348; PMCID: PMC6911019.
      View in: PubMed   Mentions: 27     Fields:    Translation:AnimalsCells
    36. Increased Epithelial Oxygenation Links Colitis to an Expansion of Tumorigenic Bacteria. mBio. 2019 10 01; 10(5). Cevallos SA, Lee JY, Tiffany CR, Byndloss AJ, Johnston L, Byndloss MX, Bäumler AJ. PMID: 31575772; PMCID: PMC6775460.
      View in: PubMed   Mentions: 34     Fields:    Translation:AnimalsCells
    37. Dysbiosis: from fiction to function. Am J Physiol Gastrointest Liver Physiol. 2019 11 01; 317(5):G602-G608. Tiffany CR, Bäumler AJ. PMID: 31509433; PMCID: PMC6879887.
      View in: PubMed   Mentions: 41     Fields:    Translation:HumansAnimals
    38. Microbiota-Nourishing Immunity: A Guide to Understanding Our Microbial Self. Immunity. 2019 08 20; 51(2):214-224. Litvak Y, Bäumler AJ. PMID: 31433969.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansAnimals
    39. Microbiota-nourishing Immunity and Its Relevance for Ulcerative Colitis. Inflamm Bowel Dis. 2019 04 11; 25(5):811-815. Byndloss MX, Litvak Y, Bäumler AJ. PMID: 30698700; PMCID: PMC6769399.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    40. omu, a Metabolomics Count Data Analysis Tool for Intuitive Figures and Convenient Metadata Collection. Microbiol Resour Announc. 2019 Apr 11; 8(15). Tiffany CR, Bäumler AJ. PMID: 30975806; PMCID: PMC6460029.
      View in: PubMed   Mentions: 15  
    41. Endogenous Enterobacteriaceae underlie variation in susceptibility to Salmonella infection. Nat Microbiol. 2019 06; 4(6):1057-1064. Velazquez EM, Nguyen H, Heasley KT, Saechao CH, Gil LM, Rogers AWL, Miller BM, Rolston MR, Lopez CA, Litvak Y, Liou MJ, Faber F, Bronner DN, Tiffany CR, Byndloss MX, Byndloss AJ, Bäumler AJ. PMID: 30911125; PMCID: PMC6533147.
      View in: PubMed   Mentions: 87     Fields:    Translation:AnimalsCells
    42. The founder hypothesis: A basis for microbiota resistance, diversity in taxa carriage, and colonization resistance against pathogens. PLoS Pathog. 2019 02; 15(2):e1007563. Litvak Y, Bäumler AJ. PMID: 30789972; PMCID: PMC6383860.
      View in: PubMed   Mentions: 34     Fields:    Translation:Humans
    43. Commensal Enterobacteriaceae Protect against Salmonella Colonization through Oxygen Competition. Cell Host Microbe. 2019 01 09; 25(1):128-139.e5. Litvak Y, Mon KKZ, Nguyen H, Chanthavixay G, Liou M, Velazquez EM, Kutter L, Alcantara MA, Byndloss MX, Tiffany CR, Walker GT, Faber F, Zhu Y, Bronner DN, Byndloss AJ, Tsolis RM, Zhou H, Bäumler AJ. PMID: 30629913.
      View in: PubMed   Mentions: 106     Fields:    Translation:AnimalsCells
    44. Inhibiting antibiotic-resistant Enterobacteriaceae by microbiota-mediated intracellular acidification. J Exp Med. 2019 01 07; 216(1):84-98. Sorbara MT, Dubin K, Littmann ER, Moody TU, Fontana E, Seok R, Leiner IM, Taur Y, Peled JU, van den Brink MRM, Litvak Y, Bäumler AJ, Chaubard JL, Pickard AJ, Cross JR, Pamer EG. PMID: 30563917; PMCID: PMC6314524.
      View in: PubMed   Mentions: 107     Fields:    Translation:HumansAnimalsCells
    45. Colonocyte metabolism shapes the gut microbiota. Science. 2018 Nov 30; 362(6418). Litvak Y, Byndloss MX, Bäumler AJ. PMID: 30498100; PMCID: PMC6296223.
      View in: PubMed   Mentions: 267     Fields:    Translation:Humans
    46. Toward Cell Type-Specific In Vivo Dual RNA-Seq. Methods Enzymol. 2018; 612:505-522. Frönicke L, Bronner DN, Byndloss MX, McLaughlin B, Bäumler AJ, Westermann AJ. PMID: 30502956.
      View in: PubMed   Mentions: 3     Fields:    Translation:Cells
    47. Terminal Deoxynucleotidyl Transferase Is Not Required for Antibody Response to Polysaccharide Vaccines against Streptococcus pneumoniae and Salmonella enterica Serovar Typhi. Infect Immun. 2018 09; 86(9). Belde V, Cravens MP, Gulandijany D, Walker JA, Palomo-Caturla I, Alugupalli AS, Sandilya VK, Mahmoud T, Bäumler AJ, Kearney JF, Alugupalli KR. PMID: 29967094; PMCID: PMC6105908.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCellsPHPublic Health
    48. Typhoidal Salmonella serovars: ecological opportunity and the evolution of a new pathovar. FEMS Microbiol Rev. 2018 07 01; 42(4):527-541. Hiyoshi H, Tiffany CR, Bronner DN, Bäumler AJ. PMID: 29790924.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansAnimalsCells
    49. Obesity treatment by epigallocatechin-3-gallate-regulated bile acid signaling and its enriched Akkermansia muciniphila. FASEB J. 2018 Jun 08; fj201800370R. Sheng L, Jena PK, Liu HX, Hu Y, Nagar N, Bronner DN, Settles ML, Bäumler AJ, Wan YY. PMID: 29882708; PMCID: PMC6219838.
      View in: PubMed   Mentions: 48     Fields:    
    50. Healthy hosts rule within: ecological forces shaping the gut microbiota. Mucosal Immunol. 2018 09; 11(5):1299-1305. Byndloss MX, Pernitzsch SR, Bäumler AJ. PMID: 29743614.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansAnimalsCells
    51. Genetic Ablation of Butyrate Utilization Attenuates Gastrointestinal Salmonella Disease. Cell Host Microbe. 2018 Feb 14; 23(2):266-273.e4. Bronner DN, Faber F, Olsan EE, Byndloss MX, Sayed NA, Xu G, Yoo W, Kim D, Ryu S, Lebrilla CB, Bäumler AJ. PMID: 29447698; PMCID: PMC6345573.
      View in: PubMed   Mentions: 38     Fields:    Translation:HumansAnimalsCells
    52. Mechanisms to Evade the Phagocyte Respiratory Burst Arose by Convergent Evolution in Typhoidal Salmonella Serovars. Cell Rep. 2018 02 13; 22(7):1787-1797. Hiyoshi H, Wangdi T, Lock G, Saechao C, Raffatellu M, Cobb BA, Bäumler AJ. PMID: 29444431; PMCID: PMC5826628.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansAnimalsCells
    53. The germ-organ theory of non-communicable diseases. Nat Rev Microbiol. 2018 02; 16(2):103-110. Byndloss MX, Bäumler AJ. PMID: 29307890.
      View in: PubMed   Mentions: 65     Fields:    Translation:Humans
    54. Precision editing of the gut microbiota ameliorates colitis. Nature. 2018 01 11; 553(7687):208-211. Zhu W, Winter MG, Byndloss MX, Spiga L, Duerkop BA, Hughes ER, Büttner L, de Lima Romão E, Behrendt CL, Lopez CA, Sifuentes-Dominguez L, Huff-Hardy K, Wilson RP, Gillis CC, Tükel Ç, Koh AY, Burstein E, Hooper LV, Bäumler AJ, Winter SE. PMID: 29323293; PMCID: PMC5804340.
      View in: PubMed   Mentions: 190     Fields:    Translation:AnimalsCells
    55. Microbiota-activated PPAR-γ signaling inhibits dysbiotic Enterobacteriaceae expansion. Science. 2017 08 11; 357(6351):570-575. Byndloss MX, Olsan EE, Rivera-Chávez F, Tiffany CR, Cevallos SA, Lokken KL, Torres TP, Byndloss AJ, Faber F, Gao Y, Litvak Y, Lopez CA, Xu G, Napoli E, Giulivi C, Tsolis RM, Revzin A, Lebrilla CB, Bäumler AJ. PMID: 28798125; PMCID: PMC5642957.
      View in: PubMed   Mentions: 462     Fields:    Translation:HumansAnimalsCells
    56. Dysbiotic Proteobacteria expansion: a microbial signature of epithelial dysfunction. Curr Opin Microbiol. 2017 Oct; 39:1-6. Litvak Y, Byndloss MX, Tsolis RM, Bäumler AJ. PMID: 28783509.
      View in: PubMed   Mentions: 265     Fields:    Translation:HumansAnimalsCells
    57. Infection and Immunity Welcomes the New Microbiology. Infect Immun. 2017 07; 85(7). Bäumler AJ. PMID: 28438979; PMCID: PMC5478962.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    58. Spore Preparation Protocol for Enrichment of Clostridia from Murine Intestine. Bio Protoc. 2017 May 20; 7(10). Velazquez EM, Rivera-Chávez F, Bäumler AJ. PMID: 29094059; PMCID: PMC5661988.
      View in: PubMed   Mentions: 1  
    59. Colonization resistance: The deconvolution of a complex trait. J Biol Chem. 2017 05 26; 292(21):8577-8581. Olsan EE, Byndloss MX, Faber F, Rivera-Chávez F, Tsolis RM, Bäumler AJ. PMID: 28389556; PMCID: PMC5448087.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansAnimalsCells
    60. A Salmonella Regulator Modulates Intestinal Colonization and Use of Phosphonoacetic Acid. Front Cell Infect Microbiol. 2017; 7:69. Elfenbein JR, Knodler LA, Schaeffer AR, Faber F, Bäumler AJ, Andrews-Polymenis HL. PMID: 28361036; PMCID: PMC5351497.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    61. Respiration of Microbiota-Derived 1,2-propanediol Drives Salmonella Expansion during Colitis. PLoS Pathog. 2017 01; 13(1):e1006129. Faber F, Thiennimitr P, Spiga L, Byndloss MX, Litvak Y, Lawhon S, Andrews-Polymenis HL, Winter SE, Bäumler AJ. PMID: 28056091; PMCID: PMC5215881.
      View in: PubMed   Mentions: 95     Fields:    Translation:AnimalsCells
    62. Iron acquisition pathways and colonization of the inflamed intestine by Salmonella enterica serovar Typhimurium. Int J Med Microbiol. 2016 Dec; 306(8):604-610. Costa LF, Mol JP, Silva AP, Macêdo AA, Silva TM, Alves GE, Winter S, Winter MG, Velazquez EM, Byndloss MX, Bäumler AJ, Tsolis RM, Paixão TA, Santos RL. PMID: 27760693; PMCID: PMC5140723.
      View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
    63. Oxygen as a driver of gut dysbiosis. Free Radic Biol Med. 2017 04; 105:93-101. Rivera-Chávez F, Lopez CA, Bäumler AJ. PMID: 27677568.
      View in: PubMed   Mentions: 120     Fields:    Translation:HumansAnimalsCells
    64. Virulence factors enhance Citrobacter rodentium expansion through aerobic respiration. Science. 2016 09 16; 353(6305):1249-53. Lopez CA, Miller BM, Rivera-Chávez F, Velazquez EM, Byndloss MX, Chávez-Arroyo A, Lokken KL, Tsolis RM, Winter SE, Bäumler AJ. PMID: 27634526; PMCID: PMC5127919.
      View in: PubMed   Mentions: 94     Fields:    Translation:AnimalsCells
    65. How bacterial pathogens use type III and type IV secretion systems to facilitate their transmission. Curr Opin Microbiol. 2017 02; 35:1-7. Byndloss MX, Rivera-Chávez F, Tsolis RM, Bäumler AJ. PMID: 27621139.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimalsCells
    66. Energy Taxis toward Host-Derived Nitrate Supports a Salmonella Pathogenicity Island 1-Independent Mechanism of Invasion. mBio. 2016 07 19; 7(4). Rivera-Chávez F, Lopez CA, Zhang LF, García-Pastor L, Chávez-Arroyo A, Lokken KL, Tsolis RM, Winter SE, Bäumler AJ. PMID: 27435462; PMCID: PMC4958259.
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    210. Salmonella enteritidis epidemic. Science. 2000 Mar 10; 287(5459):1753-4; author reply 1755-6. Ward LR, Threlfall J, Smith HR, O'Brien SJ. PMID: 10755925.
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    211. Tracing the origins of Salmonella outbreaks. Science. 2000 Jan 07; 287(5450):50-2. Bäumler AJ, Hargis BM, Tsolis RM. PMID: 10644222.
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    212. Salmonella interactions with professional phagocytes. Subcell Biochem. 2000; 33:321-42. Kingsley RA, Bäumler AJ. PMID: 10804861.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    213. Identification of a putative Salmonella enterica serotype typhimurium host range factor with homology to IpaH and YopM by signature-tagged mutagenesis. Infect Immun. 1999 Dec; 67(12):6385-93. Tsolis RM, Townsend SM, Miao EA, Miller SI, Ficht TA, Adams LG, Bäumler AJ. PMID: 10569754; PMCID: PMC97046.
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    214. Phase variation of the lpf operon is a mechanism to evade cross-immunity between Salmonella serotypes. Proc Natl Acad Sci U S A. 1999 Nov 09; 96(23):13393-8. Norris TL, Bäumler AJ. PMID: 10557331; PMCID: PMC23958.
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    215. Salmonella typhimurium leucine-rich repeat proteins are targeted to the SPI1 and SPI2 type III secretion systems. Mol Microbiol. 1999 Nov; 34(4):850-64. Miao EA, Scherer CA, Tsolis RM, Kingsley RA, Adams LG, Bäumler AJ, Miller SI. PMID: 10564523.
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    216. Extraintestinal dissemination of Salmonella by CD18-expressing phagocytes. Nature. 1999 Oct 21; 401(6755):804-8. Vazquez-Torres A, Jones-Carson J, Bäumler AJ, Falkow S, Valdivia R, Brown W, Le M, Berggren R, Parks WT, Fang FC. PMID: 10548107.
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    217. Contribution of Salmonella typhimurium virulence factors to diarrheal disease in calves. Infect Immun. 1999 Sep; 67(9):4879-85. Tsolis RM, Adams LG, Ficht TA, Bäumler AJ. PMID: 10456944; PMCID: PMC96822.
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    218. Virulent Salmonella typhimurium has two periplasmic Cu, Zn-superoxide dismutases. Proc Natl Acad Sci U S A. 1999 Jun 22; 96(13):7502-7. Fang FC, DeGroote MA, Foster JW, Bäumler AJ, Ochsner U, Testerman T, Bearson S, Giárd JC, Xu Y, Campbell G, Laessig T. PMID: 10377444; PMCID: PMC22115.
      View in: PubMed   Mentions: 99     Fields:    Translation:AnimalsCells
    219. Salmonella typhimurium IroN and FepA proteins mediate uptake of enterobactin but differ in their specificity for other siderophores. J Bacteriol. 1999 Jun; 181(11):3610-2. Rabsch W, Voigt W, Reissbrodt R, Tsolis RM, Bäumler AJ. PMID: 10348879; PMCID: PMC93834.
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    220. Ferrioxamine-mediated Iron(III) utilization by Salmonella enterica. Appl Environ Microbiol. 1999 Apr; 65(4):1610-8. Kingsley RA, Reissbrodt R, Rabsch W, Ketley JM, Tsolis RM, Everest P, Dougan G, Bäumler AJ, Roberts M, Williams PH. PMID: 10103258; PMCID: PMC91228.
      View in: PubMed   Mentions: 48     Fields:    Translation:AnimalsCells
    221. Of mice, calves, and men. Comparison of the mouse typhoid model with other Salmonella infections. Adv Exp Med Biol. 1999; 473:261-74. Tsolis RM, Kingsley RA, Townsend SM, Ficht TA, Adams LG, Bäumler AJ. PMID: 10659367.
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    222. Evolution of host adaptation in Salmonella enterica. Infect Immun. 1998 Oct; 66(10):4579-87. Bäumler AJ, Tsolis RM, Ficht TA, Adams LG. PMID: 9746553; PMCID: PMC108564.
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    223. Expression and transcriptional control of the Salmonella typhimurium Ipf fimbrial operon by phase variation. Mol Microbiol. 1998 Jul; 29(1):311-20. Norris TL, Kingsley RA, Bümler AJ. PMID: 9701823.
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    224. Multiple fimbrial adhesins are required for full virulence of Salmonella typhimurium in mice. Infect Immun. 1998 Jun; 66(6):2803-8. van der Velden AW, Bäumler AJ, Tsolis RM, Heffron F. PMID: 9596751; PMCID: PMC108273.
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    225. Mosaic structure of the smpB-nrdE intergenic region of Salmonella enterica. J Bacteriol. 1998 Apr; 180(8):2220-3. Bäumler AJ, Heffron F. PMID: 9555907; PMCID: PMC107151.
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    226. IroN, a novel outer membrane siderophore receptor characteristic of Salmonella enterica. J Bacteriol. 1998 Mar; 180(6):1446-53. Bäumler AJ, Norris TL, Lasco T, Voight W, Reissbrodt R, Rabsch W, Heffron F. PMID: 9515912; PMCID: PMC107043.
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    227. The record of horizontal gene transfer in Salmonella. Trends Microbiol. 1997 Aug; 5(8):318-22. Bäumler AJ. PMID: 9263410.
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    228. Synergistic effect of mutations in invA and lpfC on the ability of Salmonella typhimurium to cause murine typhoid. Infect Immun. 1997 Jun; 65(6):2254-9. Bäumler AJ, Tsolis RM, Valentine PJ, Ficht TA, Heffron F. PMID: 9169760; PMCID: PMC175312.
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    229. Rapid detection of Salmonella enterica with primers specific for iroB. J Clin Microbiol. 1997 May; 35(5):1224-30. Bäumler AJ, Heffron F, Reissbrodt R. PMID: 9114411; PMCID: PMC232733.
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    230. Analysis of the boundaries of Salmonella pathogenicity island 2 and the corresponding chromosomal region of Escherichia coli K-12. J Bacteriol. 1997 Feb; 179(4):1105-11. Hensel M, Shea JE, Bäumler AJ, Gleeson C, Blattner F, Holden DW. PMID: 9023191; PMCID: PMC178805.
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    231. Contribution of horizontal gene transfer and deletion events to development of distinctive patterns of fimbrial operons during evolution of Salmonella serotypes. J Bacteriol. 1997 Jan; 179(2):317-22. Bäumler AJ, Gilde AJ, Tsolis RM, van der Velden AW, Ahmer BM, Heffron F. PMID: 8990281; PMCID: PMC178699.
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    232. Fimbrial adhesins of Salmonella typhimurium. Role in bacterial interactions with epithelial cells. Adv Exp Med Biol. 1997; 412:149-58. Bäumler AJ, Tsolis RM, Heffron F. PMID: 9192007.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansAnimalsCells
    233. Identification of a new iron regulated locus of Salmonella typhi. Gene. 1996 Dec 12; 183(1-2):207-13. Bäumler AJ, Tsolis RM, van der Velden AW, Stojiljkovic I, Anic S, Heffron F. PMID: 8996108.
      View in: PubMed   Mentions: 83     Fields:    Translation:Cells
    234. Contribution of TonB- and Feo-mediated iron uptake to growth of Salmonella typhimurium in the mouse. Infect Immun. 1996 Nov; 64(11):4549-56. Tsolis RM, Bäumler AJ, Heffron F, Stojiljkovic I. PMID: 8890205; PMCID: PMC174411.
      View in: PubMed   Mentions: 76     Fields:    Translation:AnimalsCells
    235. Contribution of fimbrial operons to attachment to and invasion of epithelial cell lines by Salmonella typhimurium. Infect Immun. 1996 May; 64(5):1862-5. Bäumler AJ, Tsolis RM, Heffron F. PMID: 8613405; PMCID: PMC174006.
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    236. The lpf fimbrial operon mediates adhesion of Salmonella typhimurium to murine Peyer's patches. Proc Natl Acad Sci U S A. 1996 Jan 09; 93(1):279-83. Bäumler AJ, Tsolis RM, Heffron F. PMID: 8552622; PMCID: PMC40222.
      View in: PubMed   Mentions: 98     Fields:    Translation:AnimalsCells
    237. The pef fimbrial operon of Salmonella typhimurium mediates adhesion to murine small intestine and is necessary for fluid accumulation in the infant mouse. Infect Immun. 1996 Jan; 64(1):61-8. Bäumler AJ, Tsolis RM, Bowe FA, Kusters JG, Hoffmann S, Heffron F. PMID: 8557375; PMCID: PMC173728.
      View in: PubMed   Mentions: 80     Fields:    Translation:AnimalsCells
    238. Fur regulon of Salmonella typhimurium: identification of new iron-regulated genes. J Bacteriol. 1995 Aug; 177(16):4628-37. Tsolis RM, Bäumler AJ, Stojiljkovic I, Heffron F. PMID: 7642488; PMCID: PMC177226.
      View in: PubMed   Mentions: 65     Fields:    Translation:Cells
    239. Role of Salmonella typhimurium Mn-superoxide dismutase (SodA) in protection against early killing by J774 macrophages. Infect Immun. 1995 May; 63(5):1739-44. Tsolis RM, Bäumler AJ, Heffron F. PMID: 7729880; PMCID: PMC173218.
      View in: PubMed   Mentions: 49     Fields:    Translation:AnimalsCells
    240. Identification and sequence analysis of lpfABCDE, a putative fimbrial operon of Salmonella typhimurium. J Bacteriol. 1995 Apr; 177(8):2087-97. Bäumler AJ, Heffron F. PMID: 7721701; PMCID: PMC176853.
      View in: PubMed   Mentions: 70     Fields:    Translation:Cells
    241. Ethanolamine utilization in Salmonella typhimurium: nucleotide sequence, protein expression, and mutational analysis of the cchA cchB eutE eutJ eutG eutH gene cluster. J Bacteriol. 1995 Mar; 177(5):1357-66. Stojiljkovic I, Bäumler AJ, Heffron F. PMID: 7868611; PMCID: PMC176743.
      View in: PubMed   Mentions: 221     Fields:    Translation:AnimalsCells
    242. Salmonella typhimurium loci involved in survival within macrophages. Infect Immun. 1994 May; 62(5):1623-30. Bäumler AJ, Kusters JG, Stojiljkovic I, Heffron F. PMID: 8168923; PMCID: PMC186369.
      View in: PubMed   Mentions: 110     Fields:    Translation:AnimalsCells
    243. Fur regulon in gram-negative bacteria. Identification and characterization of new iron-regulated Escherichia coli genes by a fur titration assay. J Mol Biol. 1994 Feb 18; 236(2):531-45. Stojiljkovic I, Bäumler AJ, Hantke K. PMID: 8107138.
      View in: PubMed   Mentions: 171     Fields:    Translation:Cells
    244. Survey on newly characterized iron uptake systems of Yersinia enterocolitica. Zentralbl Bakteriol. 1993 Apr; 278(2-3):416-24. Bäumler A, Koebnik R, Stojiljkovic I, Heesemann J, Braun V, Hantke K. PMID: 8347944.
      View in: PubMed   Mentions: 11     Fields:    Translation:Cells
    245. The TonB protein of Yersinia enterocolitica and its interactions with TonB-box proteins. Mol Gen Genet. 1993 Feb; 237(1-2):152-60. Koebnik R, Bäumler AJ, Heesemann J, Braun V, Hantke K. PMID: 8384290.
      View in: PubMed   Mentions: 16     Fields:    Translation:Cells
    246. Ferrioxamine uptake in Yersinia enterocolitica: characterization of the receptor protein FoxA. Mol Microbiol. 1992 May; 6(10):1309-21. Bäumler AJ, Hantke K. PMID: 1640832.
      View in: PubMed   Mentions: 41     Fields:    Translation:Cells
    247. A lipoprotein of Yersinia enterocolitica facilitates ferrioxamine uptake in Escherichia coli. J Bacteriol. 1992 Feb; 174(3):1029-35. Bäumler AJ, Hantke K. PMID: 1732192; PMCID: PMC206184.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
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